Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1335 ATGTGCAAAAGAAGCAAGAGTTTTGGAGGCATGAACTTTCTATCTGTGTTTGGGTTTATTGGCCTAGTTGTTTTGAAATTGGTACAAGGCATGGAGAATGGTAATGTTTCAGACATGCAATATTGGGGAAGAGGCTTCTATAACAGACCCTTGCTGGTTGGTCTTACTCTTATTAATGGTGCTGCTGCCAAAGGAGCTGTGTGTCTAGATGGATCTTTACCAGGTTACCACTTCCACAGAGGATATGGTTCAGGATCAAACAGTTGGCTCATACAATTAGAGGGCGGAGGATGGTGTGGAAATATACGAAATTGTATTTACAGTAAGAGATCGCGGCACGGTTCCTCATTACATATGGAAAAACAAATACCATTTGTTGGGATATTGAGCAACAAAGCTGTGGAAAATCCAGATTTCTTCAATTGGAATAGAATAAAAGTTCGATATTGCGATGGTGCATCATTTAGTGGGGATAGCCAACATGAGGCTGCAGGACTATATTTTCGAGGACAACGCATCTGGCATGCTGCAATGGAAGATTTAATGTCAAAAGGAATGCGCTATGCCAAACAGGCTCTCCTATCTGGATGTTCTGCAGGAGGTTTAGCGTCTATACTACACTGTGATGAATTTCGGGAATTGTTTCCTAGAACTACAAGAGTAAAGTGCTTAAGTGACGCTGGATTGTTCCTTGATACTATTGATGTATCTGGCCGCCGCAGTTTGAGGAATTTGTTTGGAGGTGTGGTCACCTTACAGGGAGTGAAAAAGAACCTTCCGAGGAGTTGTACCAGTCGCTTCAATCCAATTTTGTGCTTTTTCCCTCAGCGCTTAATTGCCAGTGTTAGGACACCGCTATTTCTTCTCAATGCAGCTTATGATACTTGGCAGATTCAAGCCAGTCTAGCTCCACCATCTGCCGACTATCGCTGGAATTGGAATGACTGCAGAAAAAATTATGCAAGATGCAGTCAACCTCAGCTAAAGTATCTGCAAGGTTTTCGAAATCAGATGCTCGGAGTTGTAAGAGGCTTCTCAAGGTCTCATCAAAACGGGTTATTCATAAATTCATGTTTTGCTCATTGCCAAGCTGAAAGACAAGATACATGGTTTGCTCATGATTCTCCACATATCGGAAATAGAGGTATTGCTCAGTCTGTTGGTAATTGGTTTTTTGACCGAGTTGGAGTCCAGGCTATTGGATGCCCCTACCCTTGTGACAGAACCTGCCACAATTTGGTTTTCAACTGA 1251 0.4253 MCKRSKSFGGMNFLSVFGFIGLVVLKLVQGMENGNVSDMQYWGRGFYNRPLLVGLTLINGAAAKGAVCLDGSLPGYHFHRGYGSGSNSWLIQLEGGGWCGNIRNCIYSKRSRHGSSLHMEKQIPFVGILSNKAVENPDFFNWNRIKVRYCDGASFSGDSQHEAAGLYFRGQRIWHAAMEDLMSKGMRYAKQALLSGCSAGGLASILHCDEFRELFPRTTRVKCLSDAGLFLDTIDVSGRRSLRNLFGGVVTLQGVKKNLPRSCTSRFNPILCFFPQRLIASVRTPLFLLNAAYDTWQIQASLAPPSADYRWNWNDCRKNYARCSQPQLKYLQGFRNQMLGVVRGFSRSHQNGLFINSCFAHCQAERQDTWFAHDSPHIGNRGIAQSVGNWFFDRVGVQAIGCPYPCDRTCHNLVFN* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1335 416 Pfam Pectinacetylesterase 51 394 IPR004963 GO:0016787
Lan1g1335 416 PANTHER PECTIN ACETYLESTERASE 17 415 - -
Lan1g1335 416 PANTHER NOTUM-RELATED 17 415 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1335 Lan-Chr1 23053516 23060253 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1335 52 415 Carbohydrate Esterase AT1G57590 69.780 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1335 K19882 - gmx:100791571 742.651