Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1314 ATGGCCGCCGCTGTTCGCTTCCATTTCTATCTCTTCATTCTCTCAACAGTACTATCTTTCTACCCTCTCCTTTCTATCAATCCAGAATATGAAGCACTCATCAAACTTAAACAATCATTCTCTACCTCTAACTCTCTCTCTTCTTGGGTCCCAAATCAGAACCCATGTTCTTCAAAATGGGAAGGTGTTATCTGCGTCAATAACGCTATCACAAGCATTCATCTCCCAGATAGAGGTCTTTCTGGAAAGATTGACATCGAAGCTCTCATGCAGATTCATTCCCTTCGTTCTCTTAGTTTCGTTAGAAACAATTTTTCAGGTCCAATACCAGAATTCAATAAACTTGGTGCTCTGAAGGCTATATACTTGACCAAAAACAAATTCTCTGGTCCTATTCCTTCAGATTTCTTCTCTCAGTTAGGCTCCTTGAAGAAAATATGGATATCTAATAACAAGTTCTCTGGGAATATACCTGACTCCTTAACAAAACTTAAGCTTTTAAATGAGTTGCACCTCGAAAACAACGAGTTTTCAGGGCCTATACCTGAGTTTAACAATAGTATTAAATCTTTGGATATGTCAAACAATAAATTACAAGGTGCAATACCCGCTAGCATGGTGAATTTCGGTGCTAACTCTTTCTCTGGGAATGAAGGACTATGCGGGAAGCCATTGGATAAGGAATGTGACGGTACTTTGGCAGCGGGAAAACCTGAAAGTGGGATTAGTTGGGCGGTGAAGGTTATCATAATCCTTGCTATTGCAGCTGTTGTGGCTTTGGCTTTCATATTTATGAAGACCAAGCGTAGAAATGTTGATGATGTTAGCGTGAGGAGCACTCAAAATAATCATAGTGGTCAAAACCAAGTGGACAATGTGGTGCAAGTGCATGTTCCTAGTTCTAACCGTAGTAGGGGCTCGGAACATAGCAGCAAAAAGGGTAGTGAGTCGAAGAAAGGTTCTTCAAGGAGTGGAATGGGTGATCTTATCATGTTGAATGATGAGAAGGGTACGTTTGGATTGCCAGATTTGATGAAAGCTGCGGCTGAGGTTTTGGGAAATGGTGGGTTGGGTTCAGCTTATAAAGCTGCCATGGCGAATGGGATGTCTGTGGTGGTGAAAAGGATGCGGGAGATGAATAAAGTTAGCAGAGACATTTTTGATGCTGAGATGAGACGCTTTGGTAGGCTTAGACATCCTAATATTTTGACTCCTTTGGCTTACCATTACCGCAGAGAGGAGAAGTTATTTGTCACAGATTATAAGCCCAAAGGAAGCTTGTTATTTGTCTTGCACGGTGATAGAGGAATAAATCATGCTGAACTAAACTGGCCTACCCGTTTGAATATTGTGAAGGGAATTGCAAGAGGTTTAGGCTTCCTTTATTCTGAATTTTCATTAGAGGACTTGCCCCATGGAAACCTTAAGTCTAGCAATGTTTTACTAACAGATAATTATGAGCCACTCCTAAGTGATTTTGCCTTTCATGCACTCATCAACCCTAGCTATGCTATACAAACAATGTTTGCCTATAAAACTCCTGATTATGTACACTACCAAACCATTTCACAGAAAACTGATGTTTATTGCCTTGGAATTATCATTCTTGAAATGATCACAGGCAAATTCCCTTCTCAATATCATAGTAATGGAAAGGGTGGGACTGATGTAGTGCAATGGGTCTTCACAGCAATTTGTGATAGAAGAGAGGAGGAATTGATTGATCCAGAGTTAAAAGGCAATACAAATTCACTGAATCAAATGTTGCAACTACTACAAGTTGGGGCTTCTTGCACAGAAAGCAACCCTGAGCAAAGACTTAACATGAAAGAAGCCATTACGAGGATAGAGGAGGTACAAGTCTAA 1866 0.4046 MAAAVRFHFYLFILSTVLSFYPLLSINPEYEALIKLKQSFSTSNSLSSWVPNQNPCSSKWEGVICVNNAITSIHLPDRGLSGKIDIEALMQIHSLRSLSFVRNNFSGPIPEFNKLGALKAIYLTKNKFSGPIPSDFFSQLGSLKKIWISNNKFSGNIPDSLTKLKLLNELHLENNEFSGPIPEFNNSIKSLDMSNNKLQGAIPASMVNFGANSFSGNEGLCGKPLDKECDGTLAAGKPESGISWAVKVIIILAIAAVVALAFIFMKTKRRNVDDVSVRSTQNNHSGQNQVDNVVQVHVPSSNRSRGSEHSSKKGSESKKGSSRSGMGDLIMLNDEKGTFGLPDLMKAAAEVLGNGGLGSAYKAAMANGMSVVVKRMREMNKVSRDIFDAEMRRFGRLRHPNILTPLAYHYRREEKLFVTDYKPKGSLLFVLHGDRGINHAELNWPTRLNIVKGIARGLGFLYSEFSLEDLPHGNLKSSNVLLTDNYEPLLSDFAFHALINPSYAIQTMFAYKTPDYVHYQTISQKTDVYCLGIIILEMITGKFPSQYHSNGKGGTDVVQWVFTAICDRREEELIDPELKGNTNSLNQMLQLLQVGASCTESNPEQRLNMKEAITRIEEVQV* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1314 621 Pfam Protein kinase domain 350 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1314 621 MobiDBLite consensus disorder prediction 299 327 - -
Lan1g1314 621 ProSiteProfiles Protein kinase domain profile. 346 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1314 621 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 9 621 - -
Lan1g1314 621 Gene3D Ribonuclease Inhibitor 139 231 IPR032675 -
Lan1g1314 621 Gene3D Ribonuclease Inhibitor 28 138 IPR032675 -
Lan1g1314 621 PANTHER LRR RECEPTOR-LIKE KINASE 9 621 - -
Lan1g1314 621 MobiDBLite consensus disorder prediction 276 294 - -
Lan1g1314 621 MobiDBLite consensus disorder prediction 275 294 - -
Lan1g1314 621 Gene3D Transferase(Phosphotransferase) domain 1 423 621 - -
Lan1g1314 621 SUPERFAMILY L domain-like 28 209 - -
Lan1g1314 621 SUPERFAMILY Protein kinase-like (PK-like) 350 615 IPR011009 -
Lan1g1314 621 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Lan1g1314 621 Gene3D Phosphorylase Kinase; domain 1 313 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1314 Lan-Chr1 22843434 22846297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1314 3 621 Receptor kinase-like Gene Family AT3G42880 49.687 0.0 613
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lan1g1314 Pkinase 4.1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1314 - - gmx:100816925 862.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0960 12 16455235 16458285 Lan1g1314 1 22843434 22846297 LSH
Lan1g1314 1 22843434 22846297 Lan15g0185 15 1991177 1994883 PCT
Lan15g0185 15 1991177 1994883 Lan1g1314 1 22843434 22846297 PCT