Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1304 ATGACTGTGATGAAAATCACATGGAAAACTATATTTCCAAGTTGTTATAAGAGTGATGAAGATTTCCTATCACCAATGCCCAATAAAGTGGTGGCTTCACCTCCAAATACAACAAAGCCTAATGGTTCTTTAAGCAGGATCACTGTGACTGATTTGAGTTTTCCAAGCACAACATTTTCAGAGGATCTATCCATTTCTCTAGCAGGGTCTAACCTGCATGTTTTTTCACTTTCTGAGCTCAAGATTATAACACAGGGCTTCACTTCAAGTAACTTTTTAGGAGAAGGAGGGTTTGGACCAGTGCATAAGGGGTTCATTGATGATAAGCTTAGGCCTGGTCTTAAGGCTCAGCCTGTTGCTGTAAAGCTTTTAGATTTGGATGGATCACAGGGTCATAAAGAGTGGTTGACTGAAGTTGTGTTTCTGGGTCAACTAAGGCATCCACACCTTGTGAAGTTGATTGGATATTGTTGTGAAGAGGAACACAGACTTTTGGTATATGAATATTTACCAAGAGGGAGCTTAGAGAATCAACTTTTTAGAAGATACTCAGCATCGTTACCTTGGTCAACAAGAATGAAAATAGCTGTTGGAGCTGCAAAGGGTCTAGCCTTTTTACATGAGGCAGAGAAACCAGTCATCTATAGAGATTTTAAAGCTTCAAACATATTGTTAGACTCTGATTATGGTGCAAAACTTTCAGATTTTGGGTTGGCAAAAGATGGTCCTGAAGGAGATGATACCCATGTTTCAACTAGAGTTATGGGCACCCAAGGCTATGCTGCCCCAGAATATATCATGACAGGTCACTTGACAGCAATGAGTGATGTGTATAGCTTTGGAGTGGTCCTATTGGAGCTACTAACAGGTAGAAGGTCAGTGGATAAAGGGCGCCCACAAAGAGAACATAACCTAGTGGAATGGGCCAGGCCATACTTGAATGATTTCAGAAAACTAAGCAGAATAATGGATCCAAGGCTTGAAGGCCAGTATTCTGAAATGGGAGCAAAAAAAGCAACAGCATTGGCTTATCTATGCCTCAGCCATAGGCCTAAGAGTAGGCCAACAATGACCACAGTGGTCAAGACTCTAGAGCCACTTCAAGATTTTGATGATATACCAATTGGTCCCTTTGTTTACACTGTTCCTAGTGATAATGGTGAAAGTCATAAAGATGTAAAAGAAAGTGATGCACCTAAGGAGAGGAAGAGGGAAAATGGTGGTCATAACCATCACCACCGGAGTCGCCACCGCGACCACGGCCATAGGCATCCTCTTAGAACTCCCAAGACAACAAATTCAATGCCACAGAGTGATAAACACCAAAATGGTACTAGTGGATCAACCTCATCTGATACATCCACTGCATCAGAAAGCCAAGGAAGCAAAGTTTAG 1395 0.4179 MTVMKITWKTIFPSCYKSDEDFLSPMPNKVVASPPNTTKPNGSLSRITVTDLSFPSTTFSEDLSISLAGSNLHVFSLSELKIITQGFTSSNFLGEGGFGPVHKGFIDDKLRPGLKAQPVAVKLLDLDGSQGHKEWLTEVVFLGQLRHPHLVKLIGYCCEEEHRLLVYEYLPRGSLENQLFRRYSASLPWSTRMKIAVGAAKGLAFLHEAEKPVIYRDFKASNILLDSDYGAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYIMTGHLTAMSDVYSFGVVLLELLTGRRSVDKGRPQREHNLVEWARPYLNDFRKLSRIMDPRLEGQYSEMGAKKATALAYLCLSHRPKSRPTMTTVVKTLEPLQDFDDIPIGPFVYTVPSDNGESHKDVKESDAPKERKRENGGHNHHHRSRHRDHGHRHPLRTPKTTNSMPQSDKHQNGTSGSTSSDTSTASESQGSKV* 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1304 464 ProSiteProfiles Protein kinase domain profile. 87 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1304 464 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 35 420 - -
Lan1g1304 464 SUPERFAMILY Protein kinase-like (PK-like) 62 365 IPR011009 -
Lan1g1304 464 CDD STKc_IRAK 93 367 - -
Lan1g1304 464 Gene3D Phosphorylase Kinase; domain 1 49 169 - -
Lan1g1304 464 Pfam Protein tyrosine and serine/threonine kinase 91 364 IPR001245 GO:0004672|GO:0006468
Lan1g1304 464 MobiDBLite consensus disorder prediction 406 427 - -
Lan1g1304 464 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Lan1g1304 464 MobiDBLite consensus disorder prediction 387 405 - -
Lan1g1304 464 MobiDBLite consensus disorder prediction 381 464 - -
Lan1g1304 464 MobiDBLite consensus disorder prediction 428 464 - -
Lan1g1304 464 PANTHER OS01G0588500 PROTEIN-RELATED 35 420 - -
Lan1g1304 464 Gene3D Transferase(Phosphotransferase) domain 1 170 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1304 Lan-Chr1 22750971 22774766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1304 73 404 Glycoside Hydrolase AT3G07070 49.851 2.14e-100 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lan1g1304 PK_Tyr_Ser-Thr 9.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1304 - - gmx:100305397 703.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0968 12 16501806 16504000 Lan1g1304 1 22750971 22774766 LSH
Lan1g1304 1 22750971 22774766 Lan1g0435 1 3488134 3490181 LSH
Lan1g1304 1 22750971 22774766 Lan15g0179 15 1913069 1915500 PCT
Lan15g0179 15 1913069 1915500 Lan1g1304 1 22750971 22774766 PCT