Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1297 ATGGCAGAGCCCGCAGCCATGTACAAGTTTCTGAACCAACCCTCCTCTCATTCCAAACAAACAAACATTACAGAACCACCATCATATTCTTCTTCTTCTTCCTCTTCCTCTTCCACCCGCACCTTCCAATGCAACTTTTGCCACCGCAACTTCTTCACTTCTCAAGCTCTTGGTGGCCACCAGAATGCTCACAAACTTGAGAGAGCTGCTTCTAGGAGACCCAATAATCTCTCATTCACACACAATCATGCTTCTACCTTCCCATCAATACCACCATCTTTGAATTTGAACAGTGTTCATTTCTTTCATGGTCACCCTTGCTGGCTTCAAATGGAACAATCTTTTCAGTTTCAGACACCTCTTTCTTACCATGTTGCTGCTGTTTCTACTTCTTATACTTCCACCTACAATGCTTCTGCTTATGATGCTTCTCATAATGTTAATCTCGACCTTACTCTACGCTTGTGA 468 0.4316 MAEPAAMYKFLNQPSSHSKQTNITEPPSYSSSSSSSSSTRTFQCNFCHRNFFTSQALGGHQNAHKLERAASRRPNNLSFTHNHASTFPSIPPSLNLNSVHFFHGHPCWLQMEQSFQFQTPLSYHVAAVSTSYTSTYNASAYDASHNVNLDLTLRL* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1297 155 PANTHER OS02G0182300 PROTEIN 18 155 - -
Lan1g1297 155 ProSitePatterns Zinc finger C2H2 type domain signature. 44 64 IPR013087 -
Lan1g1297 155 Gene3D Classic Zinc Finger 15 87 - -
Lan1g1297 155 MobiDBLite consensus disorder prediction 10 37 - -
Lan1g1297 155 ProSiteProfiles Zinc finger C2H2 type domain profile. 42 69 IPR013087 -
Lan1g1297 155 PANTHER ZINC FINGER PROTEIN JAGGED 18 155 IPR045320 GO:0003700
Lan1g1297 155 MobiDBLite consensus disorder prediction 11 37 - -
Lan1g1297 155 SUPERFAMILY beta-beta-alpha zinc fingers 39 69 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1297 Lan-Chr1 22684966 22685433 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1297 37 110 C2H2 Transcription Factor Family AT5G14010 50.000 4.81e-15 66.6