Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1291 ATGCTTACATGCATAACTCGTTCCAACAAACCCGATAACGACTCAGTGAGTAAGCTTGACGAGTCCGATGGAAACACTGCTAAAAATGAAGCCGTTAAATCTCTCACTTCTCAGATAAAGGATATGGCGTTGAAAGCACCGGGGGCGTATAAGCATTGTGCTCCGTTCACGGGGCCACCGGCGCAGGGTGGTGGATTGAGGAGCAACGCGGAATCGGATCGATTCCGATGGTCGTATTGGAGAACGGGGAGCTCAACGAGAACACGGCGGAAGGAGATGGAGACGAGGCTGAAGGGGATATCAAGCAGGGAAGGGACGCCGGATTCCGCTAGTGCACGGCGGATGGTGCTGTTCGTTGAAGAGAAGGAACCGAAGGAGTGGGTGGCGCAAGTGGAGCCTGGCGTTTTGATAACATTCGTGTCGCTTCCACGTGGCGGGAACGATCTTAAGAGCATACGGTTCAGTCGGGACATGTTTAATAAATGGCAAGCTCAAAAGTGGTGGTCAGACAACTATGACAAGGTCATGGAACTTTACAATGTTCAAAGGCTTAACCGCGATGCCTTCCCTCTTCCAATGCCACCAAGGTCTGAAGATGAGAGCTCAAAGCTTGAATCAGCAGAAGCTAGCCCTGTAATACCACTAACCAAGGAACGGCTACCTTGTACTTTGCACCGCCCAACAGGGATTGGAATGGGATATTCATCCTCAGATTCCTTAAATCATCAATCAATCCACTCCCCACATTTCACTGACTCGACTACTGGCATGAGCTCAACCCCAGAAGCTTCCACCATTAGTACAGCCAAGACAGAGTTGTCATCGACGGATGCTTCTATCATAAGTAGCCCATCCAGAGATGCTGATCACTCCTGTGATCTATCAAACAGCAATGCTAGTGATTTGGAGACTGAATGGGTTGAGCAAGATGAACCTGGGGTTTACATTACCATCAGAGCATTGCCAGGTGGCAAAAGGGAGCTCAGACGAGTCAGATTCAGCCGAGAAAAATTTGGGGAGGTCCATGCTACATTATGGTGGGAGGAGAACCGTGCTAGAATTCATGAACAATACTTGTGA 1080 0.4935 MLTCITRSNKPDNDSVSKLDESDGNTAKNEAVKSLTSQIKDMALKAPGAYKHCAPFTGPPAQGGGLRSNAESDRFRWSYWRTGSSTRTRRKEMETRLKGISSREGTPDSASARRMVLFVEEKEPKEWVAQVEPGVLITFVSLPRGGNDLKSIRFSRDMFNKWQAQKWWSDNYDKVMELYNVQRLNRDAFPLPMPPRSEDESSKLESAEASPVIPLTKERLPCTLHRPTGIGMGYSSSDSLNHQSIHSPHFTDSTTGMSSTPEASTISTAKTELSSTDASIISSPSRDADHSCDLSNSNASDLETEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEVHATLWWEENRARIHEQYL* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1291 359 ProSiteProfiles BRX domain profile. 304 359 IPR013591 -
Lan1g1291 359 MobiDBLite consensus disorder prediction 13 27 - -
Lan1g1291 359 MobiDBLite consensus disorder prediction 1 31 - -
Lan1g1291 359 Pfam Transcription factor regulating root and shoot growth via Pin3 125 179 IPR013591 -
Lan1g1291 359 Pfam Transcription factor regulating root and shoot growth via Pin3 303 358 IPR013591 -
Lan1g1291 359 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 359 IPR044532 -
Lan1g1291 359 MobiDBLite consensus disorder prediction 190 210 - -
Lan1g1291 359 PANTHER PROTEIN BREVIS RADIX-LIKE 4 1 359 - -
Lan1g1291 359 ProSiteProfiles BRX domain profile. 125 180 IPR013591 -
Lan1g1291 359 MobiDBLite consensus disorder prediction 244 298 - -
Lan1g1291 359 Pfam Transcription factor BRX N-terminal domain 25 56 IPR027988 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1291 Lan-Chr1 22654028 22658415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1291 1 359 Major Intrinsic Protein MIP AT1G31880 43.081 2.04e-81 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1291 - - gmx:100794109 528.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0983 12 16585758 16590874 Lan1g1291 1 22654028 22658415 LSH
Lan1g1291 1 22654028 22658415 Lan1g0423 1 3390637 3397075 LSH
Lan1g1291 1 22654028 22658415 Lan14g0122 14 1519395 1525312 PCT
Lan14g0122 14 1519395 1525312 Lan1g1291 1 22654028 22658415 PCT