Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1283 ATGGTTTGGTTTCAATGCGAAGATTGTGGTGACAACCTCAAAAAACCTAAGTTGGTTGGTCATTTCCGATCTTGCTCCGCTTACAAGCTATCGTGCATTGATTGTGGAGAAATATTTGGGCAAGACACTGTTCAGAATCACACACAGTGTATAACTGAAGCGGAAAAGTATGGTCCAAAAGGCCAAGGGAAAACTTCAAATGTTACACCTTCCAAGCCTAATGATAAGCAAAAGCCTGAAGTTGATATTAATGTGGGGCTATCTCAACGGCCTCCATGGTTTTGTAGTCTTTGCAATACAAAAGCTACAAGTCAGCAAACCCTCCTTCTCCATGCTGATGGTAAGAAACATAGGGCGAGAGCCCGAGCCGTCCATGCTTCAAAGCAACAATCAGCCCAGACAGACAAATCTACCACTGATGCTAAGGTTACAGTGGAGACTGCTACAAATGGTGAGGTGAGAGGCGACCAAAATGCAGACCAGGCAAAATTGCAAGAGTCTTCTAAACAAGACAACTTGAAACCAGAGAATGAAATTTCTTCTGCAAACAAAAAGAGGAAATTCGATGAGTCAGAAGGTGGTCTTGTTAAGAAAAGTAAGAATGGCAATTCAGCCGACAATGAAAATGGGCAAGTAATTCAGGGTGAAGGAGCAGAAGTGGCAAAAGGAGACAAAAAGAAAATAAAGTGGAAGAAGTTCATAAAATCAGCCTTGAAATCTCACCCTGATGGAATTTTGAAGATGAAGAAACTGAGAAAAGCTGTCCACAGAGCACTGCAGGAATCCGACATTGTTGTTGATGAATCTGAATTGAGCGAGACCCTTCAGCAGAAGATCGATTCCAGCTCCGGATTTGCAGTTGAGGGCAAGTATGTGCGATTGGTAGTGAAAGATTGA 897 0.4259 MVWFQCEDCGDNLKKPKLVGHFRSCSAYKLSCIDCGEIFGQDTVQNHTQCITEAEKYGPKGQGKTSNVTPSKPNDKQKPEVDINVGLSQRPPWFCSLCNTKATSQQTLLLHADGKKHRARARAVHASKQQSAQTDKSTTDAKVTVETATNGEVRGDQNADQAKLQESSKQDNLKPENEISSANKKRKFDESEGGLVKKSKNGNSADNENGQVIQGEGAEVAKGDKKKIKWKKFIKSALKSHPDGILKMKKLRKAVHRALQESDIVVDESELSETLQQKIDSSSGFAVEGKYVRLVVKD* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1283 298 Gene3D - 1 50 - -
Lan1g1283 298 PANTHER CELL GROWTH-REGULATING NUCLEOLAR PROTEIN LYAR 1 295 IPR039999 GO:0003677
Lan1g1283 298 ProSiteProfiles Zinc finger C2HC LYAR-type profile. 27 51 - -
Lan1g1283 298 SUPERFAMILY beta-beta-alpha zinc fingers 1 26 IPR036236 -
Lan1g1283 298 Pfam Zinc-finger of C2H2 type 93 117 - -
Lan1g1283 298 Gene3D Classic Zinc Finger 87 135 - -
Lan1g1283 298 MobiDBLite consensus disorder prediction 126 166 - -
Lan1g1283 298 MobiDBLite consensus disorder prediction 57 79 - -
Lan1g1283 298 Pfam LYAR-type C2HC zinc finger 30 57 IPR014898 -
Lan1g1283 298 ProSiteProfiles Zinc finger C2HC LYAR-type profile. 1 26 - -
Lan1g1283 298 SUPERFAMILY beta-beta-alpha zinc fingers 30 58 IPR036236 -
Lan1g1283 298 SMART ZnF_U1_5 90 124 IPR003604 GO:0003676|GO:0008270
Lan1g1283 298 MobiDBLite consensus disorder prediction 112 218 - -
Lan1g1283 298 MobiDBLite consensus disorder prediction 167 196 - -
Lan1g1283 298 SUPERFAMILY beta-beta-alpha zinc fingers 71 126 IPR036236 -
Lan1g1283 298 MobiDBLite consensus disorder prediction 197 211 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1283 76 189 C2H2 Transcription Factor Family AT2G19380 47.009 2.65e-19 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1283 K15263 - gmx:100790703 428.328