Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1281 ATGGAGGAAATATCTTCAGCTGTTGCAGTACCATTCACACTTGGGAATCTGATTCAAAAGGAGTCTGCTAAGCTTATGGCAAATACAGCAACAACTTTAATATTAAATCATGCAATAGAGGGTAATTGTCAATCATTTTTTTCTGTTAAAAGTGAAAACCATGTACCAGGTATTAGTCTACAAGACCAAGTTATGGTATCTTCTGAGGTAGAGGAGAATCAAGTTGGATCAGCCCTTGTCTCAGAAATGGTTATTCAATGTGACAGTAATTGTATCTTGACTGAAAACCATGAGCAGCCAATAAAGGCAGATGAACTCATGTTGGCTGTGGATTTTCAGTGTTTACATAATGATAAAAGAAGTCCTTGTGATGAGAAAGCTGCTTATTCCGAAACAGATTCGCCGATTATTATCAAGGTTGATGGTAACAATATTCATGGTAAGTCAATGCAGGACATAGTGTCTGTTGCAATGGATGCTGAGATTGAGGATCAAAGTGGATCAGATGGGTCTGATCAAAAGCCATCTTCTGTGCTTCCTGATCAATTGAGAGAGGAGAAGAAAACAAGGTATCAGAATGCTTCAGTAACGAGCCGCGGCCCTTTATATGGTTCGTCATCAATTTGTGGAAAAAGAGAGGAGATGGAAGATGCTATTGCTGCTAAGCCTCAACTCTTAAAAGTCTCTTCAAAGATGCTGCTAATGGATGACCATGTGAATGAAAACACAAAATACTCACTAGCCCACTTTTTTGGTGTCTATGATGGACATGGAGGCTTTCAGGTTGCTAATTACTGTCGGGAACGTCTTCATTCGGCATTAATTGAGGAGATAGAAGCTGCACAATCAAGTTTTGCAGAAACAAATAAGGGAGATGAATGGCAGAACCAATGGAAGAAAGCATTCGCCAATTGTTTTCGGAAAGTAGATGATGAGGTTGGAGGAATTCGCGCAAACAAAAGTGGTGGATATCAGTCTAATATTGAACCTCTTGCTCCTGACACTGTTGGCTCTACTGCTGTGGTTGCTGTTTTAAGTCAAAACCACATTATAGTTGCAAATTGTGGGGATTCAAGGGCGGTCTTGTATCGTGGAAAAGAAGCATTGCCATTGTCGATTGATCACAAACCAAATAGAGAGGATGAATGGGCAAGGATAGAAGCTGCAGGAGGAAGGGTCATAAATTGGAAAGGATACAGAGTTGTTGGTGTCTTGGCCATGTCAAGGTCCATAGGTGATAGATACTTGAAACCATACATAATTCCAGAACCAGAAGTTATGTTTGTGCAACGAGAGAAAAATGATGAGTGCCTTATTCTAGCTAGCGATGGTTTATGGGATGTAGTGACAAATGAAGAAGCATGCGAAGTTGCGCGTAAGGGAATCCTTCTTTGGCACAAGAAGTATGGAGACAATGGATCAACAGTACATGGCAAAGGAGTTGATCCTGCAGCTCATCATGCTGCAGAGTATCTTTCTAGACTTGCCCTCCAAAGAGGAAGCCAAGATAACATCTCTATAATTGTGATAGACTTGAAGGCTCAAAGAAAAATTAAGAGAGGCATGAAATAA 1572 0.4046 MEEISSAVAVPFTLGNLIQKESAKLMANTATTLILNHAIEGNCQSFFSVKSENHVPGISLQDQVMVSSEVEENQVGSALVSEMVIQCDSNCILTENHEQPIKADELMLAVDFQCLHNDKRSPCDEKAAYSETDSPIIIKVDGNNIHGKSMQDIVSVAMDAEIEDQSGSDGSDQKPSSVLPDQLREEKKTRYQNASVTSRGPLYGSSSICGKREEMEDAIAAKPQLLKVSSKMLLMDDHVNENTKYSLAHFFGVYDGHGGFQVANYCRERLHSALIEEIEAAQSSFAETNKGDEWQNQWKKAFANCFRKVDDEVGGIRANKSGGYQSNIEPLAPDTVGSTAVVAVLSQNHIIVANCGDSRAVLYRGKEALPLSIDHKPNREDEWARIEAAGGRVINWKGYRVVGVLAMSRSIGDRYLKPYIIPEPEVMFVQREKNDECLILASDGLWDVVTNEEACEVARKGILLWHKKYGDNGSTVHGKGVDPAAHHAAEYLSRLALQRGSQDNISIIVIDLKAQRKIKRGMK* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1281 523 MobiDBLite consensus disorder prediction 163 199 - -
Lan1g1281 523 Pfam Protein phosphatase 2C 203 505 IPR001932 -
Lan1g1281 523 SMART PP2C_SIG_2 234 512 IPR001932 -
Lan1g1281 523 CDD PP2Cc 203 512 IPR001932 -
Lan1g1281 523 SMART PP2C_4 192 510 IPR001932 -
Lan1g1281 523 ProSiteProfiles PPM-type phosphatase domain profile. 202 512 IPR001932 -
Lan1g1281 523 PANTHER PROTEIN PHOSPHATASE 2C ABI2-LIKE PROTEIN 148 520 - -
Lan1g1281 523 SUPERFAMILY PP2C-like 189 513 IPR036457 -
Lan1g1281 523 Gene3D - 191 522 IPR036457 -
Lan1g1281 523 ProSitePatterns PPM-type phosphatase domain signature. 250 258 IPR000222 GO:0043169
Lan1g1281 523 PANTHER ALPHABET, ISOFORM E-RELATED 148 520 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1281 Lan-Chr1 22588481 22591453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1281 201 519 PP2C-type Phosphatase Gene Family AT1G17550 60.494 1.50e-136 403
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1281 K14497 - gmx:100789207 664.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0994 12 16656029 16659184 Lan1g1281 1 22588481 22591453 LSH
Lan1g1281 1 22588481 22591453 Lan15g0160 15 1775698 1777913 PCT
Lan1g1281 1 22588481 22591453 Lan14g0129 14 1599237 1602080 PCT
Lan15g0160 15 1775698 1777913 Lan1g1281 1 22588481 22591453 PCT
Lan14g0129 14 1599237 1602080 Lan1g1281 1 22588481 22591453 PCT