Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1265 ATGCCTCCAAGAATCTTACTATGCGGCGACGTTTTAGGCCGCCTCAACCACCTCTTCAAGCGCGTCTCATCGGTAAACAAATCAGCGGGTCCATTCGACGCGCTTTTATGCGTGGGTCAGTTCTTCCCTGACTCACTTGATCAGCTTGACGAGTTCATTGCCTATATTGAAGGTCGCTCTCAGTCGAAGTTTCCTCTTCCTATTTACTTCATTGGTGATTATGGCATTGGTGCCCCGAAAGTTTTGTTGCAGGCTTCAAAGGACTCTGCTAACCTTGGATTCAAGATGGATGGGTTGAGGATATGTGATAATTTGTTTTGGTTGAAAGGCAGTGGCAAATTCAACCTAGTTGGGTTATCTGTGGTCTATTTATCTGGTATTAAATCACCAAATGCTCAACAGTTTGGAACTTACAGTCAAGATGATGTTGACGCTTTGCGTGCAATAGCTGAGGAACCTGGAATTATTGACTTGTTCTTGACTAACGAGTGGCCAAGTGGGGTCACAAGAGAAGCAGCTACTTCAGACATTCCTGCTGGACTCTCAGATTCAGTAGGCAGTGATTCAACAATATCAGAGTTAGTACAAGAGATTAAACCACGATATCACATTGTTGGCACTAAAGGTATATACTATGCACGTGAACCATATTCCAATGTTGATGCTGTGCACGTGACTCGTTTTATAGGGCTTGCTTCTGTTGGAAATAGAGATAAGCAGAAATTTATTCATGCAATTTCTCCCACACCTGCATCCACCATGTCTTCAACCGAGATTGCCATGAAAACCACAAATACCACCTTATCACCATACACATTTTTGGAGAAAAGTACTTCTCCAAGGGATGCCTCAAAGAGATCCAGCGATGATATCTCTGGTTCTCAACATTGGAGATATGATGTATCTCAAAAGCGACAGAAACATGGAGCTGAAAATGGTAATAAGTTGTGTTTCAAATTTGTATCTTCTGGCTCTTGTCCCCGTGGAGAGGAGTGCTATTTTCGACACGACTCAGATGCAAGGGAACACTCTGTGAGAGGTGTTTGTTTTGAATTTTTGAACAAGGGAAAGTGTGAAAGGGGCCCTGATTGCAACTTTAAGCATAGCTTGCAGGAGGAAGATGATAGGAATTCTTCCAGAAGGCCTGGATCTGAAAGTATCAGATCAAAAGAATGTTGGTTTTGCTTGTCAAGCCCCAATGTGGAGTCACATTTAATCATAAGCATTGGGGAAAATTACTACTTGGCACTGGCTAAAGGTCCACTTGTTGATGACCATGTGCTGATAATACCAGTTGAGCATATGCCAAGTACCTTATCTCTGTCATCTGAATCTGAAGATGGTCTCTATAGGTTCCAGAACAGTCTTACGAGGTTTTGCAAGAACCAAGGAAAGGAAGTCATCTTTTTCGAGTGGGTTTCCGTTCGTGGCACTCATGCCAATCTGCAGGCCATTCCTATTCCAGCTTCAAAAGCAGCGATGGCTGTTAAAGCATTCAATTTAGCTTCACAAAAGTTGGGGTTTAAATTTATTGAAAAGAAATTTGATAGCATTTCTGATGGAAGAAAATTTTTGTCGACACAAATTGATGGGAACCAAAGTTTGTTCTATGCTGAAATCCCAGGGGGCACAGTGCTGCTGCATCATGTTGAGGAGAAAGTGAAATTTCCTGCTCAATTTGGACGCGAGGTTCTGGCGGGGTTGCTTAATATGGCAGATAATGCAGATTGGAGGAATCACAAACATAGCAAAGAGGAAGAAATGAAAATCGTGGAAGATTTCAAGAGCCGATTCCAAGAATATGATCCAAACTGTTGA 1818 0.4235 MPPRILLCGDVLGRLNHLFKRVSSVNKSAGPFDALLCVGQFFPDSLDQLDEFIAYIEGRSQSKFPLPIYFIGDYGIGAPKVLLQASKDSANLGFKMDGLRICDNLFWLKGSGKFNLVGLSVVYLSGIKSPNAQQFGTYSQDDVDALRAIAEEPGIIDLFLTNEWPSGVTREAATSDIPAGLSDSVGSDSTISELVQEIKPRYHIVGTKGIYYAREPYSNVDAVHVTRFIGLASVGNRDKQKFIHAISPTPASTMSSTEIAMKTTNTTLSPYTFLEKSTSPRDASKRSSDDISGSQHWRYDVSQKRQKHGAENGNKLCFKFVSSGSCPRGEECYFRHDSDAREHSVRGVCFEFLNKGKCERGPDCNFKHSLQEEDDRNSSRRPGSESIRSKECWFCLSSPNVESHLIISIGENYYLALAKGPLVDDHVLIIPVEHMPSTLSLSSESEDGLYRFQNSLTRFCKNQGKEVIFFEWVSVRGTHANLQAIPIPASKAAMAVKAFNLASQKLGFKFIEKKFDSISDGRKFLSTQIDGNQSLFYAEIPGGTVLLHHVEEKVKFPAQFGREVLAGLLNMADNADWRNHKHSKEEEMKIVEDFKSRFQEYDPNC* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1265 605 SUPERFAMILY HIT-like 390 463 IPR036265 -
Lan1g1265 605 SUPERFAMILY CCCH zinc finger 314 340 IPR036855 GO:0046872
Lan1g1265 605 PANTHER CWF19, CELL CYCLE CONTROL PROTEIN 2 604 IPR040194 -
Lan1g1265 605 ProSiteProfiles Zinc finger C3H1-type profile. 311 339 IPR000571 GO:0046872
Lan1g1265 605 PANTHER CWF19-LIKE PROTEIN 1 2 604 - -
Lan1g1265 605 MobiDBLite consensus disorder prediction 279 293 - -
Lan1g1265 605 Gene3D - 386 508 IPR036265 -
Lan1g1265 605 ProSiteProfiles Zinc finger C3H1-type profile. 348 371 IPR000571 GO:0046872
Lan1g1265 605 Pfam Protein similar to CwfJ C-terminus 2 514 602 IPR006767 -
Lan1g1265 605 CDD MPP_CWF19_N 6 234 - -
Lan1g1265 605 SMART c3hfinal6 313 338 IPR000571 GO:0046872
Lan1g1265 605 SMART c3hfinal6 344 370 IPR000571 GO:0046872
Lan1g1265 605 Pfam Protein similar to CwfJ C-terminus 1 386 499 IPR006768 -
Lan1g1265 605 Gene3D - 300 371 - -
Lan1g1265 605 MobiDBLite consensus disorder prediction 271 306 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lan1g1265 CwfJ_C_1 5.9e-38 CL0265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1265 K24939 - gmx:100782106 1031.55