Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1251 ATGTGTGGAGGAGGAGGAAAAACATATGGGTTAGATTTGGAATTTCTCAAACCATGTTCATTCTCAGTGTGTTCTTCTTCACCATCCTCAACTATCTCAGAATCAAGCAATTCAGCTATAACAATCTCAACTACAAAACCCAGAACACGAAGAAAGAGACCAAACCAAAACTACAATGAAGCCGCAGCACTTCTTTCAACCGCATACCCAAACCTTTTCTCTTCCAAAACCCTTAAAACGCAACCATCAAGTATATTTTTCAACGAAGATCTTTCATCGGAAGTTCTATTACCTTTTAGGGTTTTAGACTCGTCTTCATCATTTTTACTTGATCAATGTAAGGCTAGTTTCTCAATGAAGCCTAAAGTGGTGATGTTGCAAGAGAAACTGTGTCAGAGCCCGGGGGAGATAAATTCGGCTTCGGCGATGAACAATTCGGTTGAACTGGAGGATGATTATGGTGAAGTTTACGATGCGGAATCGATTCTGGATGAGGAAATTGGAGAAGGCATTGATAGTATTATGGGGAGTTTGACGGAGAAGGACACTGACGGCGCCGTTTCCTGTCAGATGATTCCGGCGATTGATTCTGGCGGGAAACTGGATTGCAGGTTAGGGTTAAAAAGGGCTCTCCGCGACGTTGATGATGGTGGCAACTGGTGGAATTTACCGGCGGTTGATATAGTTAAAATTTCGCCAAAGATTGTCTACAAGTCGCCGCCGCCTGCGGTGGCGGAGAAGAAAAAGAAAAGGAAGAAGGTGGAGGTAAAGAACCCGGAACCGGTGGCAGTGAAGGAAAATCCTGTGGTGAAATCGGATACGGGTTTGATGTTGAAATTGAATTACAACGAGGTGAAGAATGCTTGGTCTGACAAGGGTTCACCGTTCGCCGATGATAGCCCCGTTTCCGGTGCATCGGTAAATGACGTCACCGCGCGGTTGTCTCAAATTGATTTGTTATGGGACAATGGAAGTGTGAGAGAAGCTAGTGTGCTGCGCTACAAAGAAAAGCGCCATATGCGCCTCTTGTCCAACAAGATCAGGTGTCAGGTTAGAAAAGTCAATGCTGATCAACGGCCCAGATTGAAGGTACCACCCAGTTGA 1104 0.4511 MCGGGGKTYGLDLEFLKPCSFSVCSSSPSSTISESSNSAITISTTKPRTRRKRPNQNYNEAAALLSTAYPNLFSSKTLKTQPSSIFFNEDLSSEVLLPFRVLDSSSSFLLDQCKASFSMKPKVVMLQEKLCQSPGEINSASAMNNSVELEDDYGEVYDAESILDEEIGEGIDSIMGSLTEKDTDGAVSCQMIPAIDSGGKLDCRLGLKRALRDVDDGGNWWNLPAVDIVKISPKIVYKSPPPAVAEKKKKRKKVEVKNPEPVAVKENPVVKSDTGLMLKLNYNEVKNAWSDKGSPFADDSPVSGASVNDVTARLSQIDLLWDNGSVREASVLRYKEKRHMRLLSNKIRCQVRKVNADQRPRLKVPPS* 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1251 367 MobiDBLite consensus disorder prediction 27 45 - -
Lan1g1251 367 ProSiteProfiles CCT domain profile. 327 367 IPR010402 GO:0005515
Lan1g1251 367 PANTHER OS02G0148000 PROTEIN 3 363 - -
Lan1g1251 367 Pfam CCT motif 327 363 IPR010402 GO:0005515
Lan1g1251 367 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 3 363 - -
Lan1g1251 367 MobiDBLite consensus disorder prediction 27 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1251 Lan-Chr1 22357982 22360055 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1251 274 363 C2C2-CO-like Transcription Factor Family AT1G73870 41.121 8.45e-13 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lan1g1251 CCT 3.8e-10 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1251 - - aprc:113845796 365.925
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1022 12 16900407 16903433 Lan1g1251 1 22357982 22360055 LSH
Lan1g1251 1 22357982 22360055 Lan1g0391 1 3081140 3084684 LSH