Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1244 ATGGCTTCACAAGAAAAAAAGCTGCAAAAAAGCTATTTTGATGTGCTGGGATTATGTTGCTCCTCGGAGGTACCACTGATCGAGGGTATCCTCAAACCTATTGAAGGGATCAAAGATGTTTCAGTCGTAGTTCCATCTAGAACTGTCATTGTTGTTCATGACATGCTTGTCGTTTCGCCACTTCAAATTGCGAAAGCTCTGAATGAAGCTAGATTGGAAGCAAATATCAGAGTGTATGGTGAAGAAAATCACCAAAAGAAATGGCCAAGCCCTTATGTTGTTGCTTCTGGTGTTCTACTTTTGCTTTCATTTCTAAAATATGTATACCATCCCTTGCAATATCTGGCCCTTGGAGCTGTTGCTGCAGGCATCTTTCCAATCATCTTAAAAGCTATTGTGTCAATTCGAAACTTTAGAATTGATATTAACATTCTCATGATCATAGCAGTTATTGGGACAATTGCTATGAAAGATTATTTGGAAGCAGGGACAATTGTTTTCCTCTTCTCAATTGCAGAATGGCTCGAAACAAGGGCAAGTCACAAGGCAAATGCAGTAATGTCATCATTGATGAGCATTACCCCTAAAAAAGCAGTGATAGCTGAAACAGGAGAGGAGGTGGATGCTGATGATGTGAAAGTAAACACTATTATTGCTGTTAAGACAGGGGAAGTAATACCCATTGATGGGGTTGTTGTAGATGGGAACTGTGAAGTTGATGAGAAAACTTTAACAGGAGAGTCATTTCCAGTACCTAAACAAAGGGATTCAATTGTATGGGCTGGCACCATCAATTTAAATGGTTATATTAGTGTGAAAACTACTGCAATGGCTGAGGATTGTGTGGTGGCTAAAATGGCAAAGCTTGTGGAAGAAGCTCAAAACAGCAAAACCAGCACTCAAAGATTGATTGACAAGTTTGCCAAGTTTTACACCCCAGCTGTTGTAGCCATAGCAGCTCTTGTAGCGGTGATTCCACTTGCCTTTAGAGTCCGTAACGAGAAACACTGGCTTCACTTTGCATTAGTTGTTTTAGTAAGTGCATGTCCATGTGCACTGATCCTTTCGACACCAGTTGCAACCTTTTGTGCTTATACAAAAGCCGCTACAATCGGTCTTCTCATCAAAGGGGGTGATCATCTTGAAACACTAGCAAAAGTTAAGGTCATAGGTTTTGACAAAACTGGTACCATAACAAAGGGTGAATTCGAGGTGACAAAATTTCAATCTCTTTCAGATGACATTGATTTGAACACATTGATTCACTGGGTGTCAAGCATTGAAAGCAAGTCAAGTCATCCCTTGGCAGAAGCAATTGTTGATTATGGAAAGTCTCTCTCCATTGAACCAAAGCCTGAAGAGGTGACTGGATTTGAAAATTTTCATGGAGAAGGAATATCCGGAACAATAGATGGTAGAGTTCTGTACATCGGAAATAAAAAAATTGCCACTAGAGCTGGGTCTGAAACAGTTCCAACCTTAGCAGGTGAAAATCAAAGAGGAAAGACCACTGGCTACATATACTCTGAAGCAACCCCAATTGGATATTTCTCTCTCTCAGATACTTGCCGGACCGGTGTTCAGGAGGCAATAGGGAAGCTCAAGTCAATGGGAATCAAAACTGCTATGCTTACAGGAGATAGTCAAGCAGCTGCAATGCAAGCACAGGAGCAGCTAGAGCAGGCTCTGGAATTAATCCATGCAGAACTTTTGCCAGAGGACAAAGTAAAAATCATTTCAGAATTTAAAAAGGAAGGTCTAACAGCTATGGTTGGAGATGGTGTAAATGACGCGCCTGCATTAGCTACAGCTGACATAGGAATCTCGATGGGCATTTCAGGTTCTGCACTGGCAAGTGAGACGGGCAATATAATTCTTATGTCGAATGACATTAGGAAGATACCTGAAGCCATTAAGCTTGCAAGAAAATCCCATAGGAAAGTTTTAGAAAATATTGTTTTATCAATCACTACTAAGGTTGCAATTATTGGTTTGGCCATTGGTGGTTATCCAATTGTTTGGGCTGCAGTTCTTGCTGATGTTGGAACATGTTTGTTGGTGATCTTAAATAGCATGTTGCTTCTGCGAAAAGGAAAAGGACAAGGACACAGACTCGATCATGGAGGACAATGCTGTAAATCTTCCACCCAGCTACACAACCATAAAAATGGATGTGATCACGATCACCATCATGGTCACGATCATCATCACCAACATGGCCACGATCACGATCACCAACATGATCATGATCACCAACACGGTCACGATCACGATCACCAACATGGTCACGATCACGATCACCATCATGGTCACGATCACGATCACCAACATGGTCACGATCACGATCACCAACATGGTCACGATCACAATCACCAACATGGTCACGATCATGATCACCAACATGATCATGATCACCAACATGATCATGATCACCAACACGGTCACGATCATGATCACCAACATGGACACAAAGGGCAAGGTTGTGAAGCAGGCGTACCAAAAATTATTGTTGAACAGGTGTAG 2523 0.4166 MASQEKKLQKSYFDVLGLCCSSEVPLIEGILKPIEGIKDVSVVVPSRTVIVVHDMLVVSPLQIAKALNEARLEANIRVYGEENHQKKWPSPYVVASGVLLLLSFLKYVYHPLQYLALGAVAAGIFPIILKAIVSIRNFRIDINILMIIAVIGTIAMKDYLEAGTIVFLFSIAEWLETRASHKANAVMSSLMSITPKKAVIAETGEEVDADDVKVNTIIAVKTGEVIPIDGVVVDGNCEVDEKTLTGESFPVPKQRDSIVWAGTINLNGYISVKTTAMAEDCVVAKMAKLVEEAQNSKTSTQRLIDKFAKFYTPAVVAIAALVAVIPLAFRVRNEKHWLHFALVVLVSACPCALILSTPVATFCAYTKAATIGLLIKGGDHLETLAKVKVIGFDKTGTITKGEFEVTKFQSLSDDIDLNTLIHWVSSIESKSSHPLAEAIVDYGKSLSIEPKPEEVTGFENFHGEGISGTIDGRVLYIGNKKIATRAGSETVPTLAGENQRGKTTGYIYSEATPIGYFSLSDTCRTGVQEAIGKLKSMGIKTAMLTGDSQAAAMQAQEQLEQALELIHAELLPEDKVKIISEFKKEGLTAMVGDGVNDAPALATADIGISMGISGSALASETGNIILMSNDIRKIPEAIKLARKSHRKVLENIVLSITTKVAIIGLAIGGYPIVWAAVLADVGTCLLVILNSMLLLRKGKGQGHRLDHGGQCCKSSTQLHNHKNGCDHDHHHGHDHHHQHGHDHDHQHDHDHQHGHDHDHQHGHDHDHHHGHDHDHQHGHDHDHQHGHDHNHQHGHDHDHQHDHDHQHDHDHQHGHDHDHQHGHKGQGCEAGVPKIIVEQV* 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1244 840 SUPERFAMILY HAD-like 390 692 IPR036412 -
Lan1g1244 840 Pfam E1-E2 ATPase 201 369 - -
Lan1g1244 840 SUPERFAMILY Calcium ATPase, transduction domain A 205 290 IPR008250 -
Lan1g1244 840 MobiDBLite consensus disorder prediction 723 832 - -
Lan1g1244 840 SUPERFAMILY HMA, heavy metal-associated domain 5 75 IPR036163 GO:0046872
Lan1g1244 840 Gene3D - 4 78 - -
Lan1g1244 840 SFLD Haloacid Dehalogenase 374 643 - -
Lan1g1244 840 Gene3D - 382 642 IPR023214 -
Lan1g1244 840 Pfam haloacid dehalogenase-like hydrolase 387 605 - -
Lan1g1244 840 TIGRFAM ATPase-IB2_Cd: cadmium-translocating P-type ATPase 142 696 - -
Lan1g1244 840 ProSitePatterns E1-E2 ATPases phosphorylation site. 393 399 IPR018303 -
Lan1g1244 840 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 165 672 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan1g1244 840 PRINTS P-type cation-transporting ATPase superfamily signature 240 254 - -
Lan1g1244 840 PRINTS P-type cation-transporting ATPase superfamily signature 391 405 - -
Lan1g1244 840 PRINTS P-type cation-transporting ATPase superfamily signature 537 547 - -
Lan1g1244 840 PRINTS P-type cation-transporting ATPase superfamily signature 591 610 - -
Lan1g1244 840 PRINTS P-type cation-transporting ATPase superfamily signature 615 627 - -
Lan1g1244 840 Gene3D - 402 523 IPR023299 GO:0000166
Lan1g1244 840 PRINTS Copper-transporting ATPase signature 182 200 - -
Lan1g1244 840 PRINTS Copper-transporting ATPase signature 313 327 - -
Lan1g1244 840 PRINTS Copper-transporting ATPase signature 569 586 - -
Lan1g1244 840 PRINTS Copper-transporting ATPase signature 626 640 - -
Lan1g1244 840 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 142 694 IPR027256 GO:0006812|GO:0016021|GO:0019829
Lan1g1244 840 CDD P-type_ATPase_HM 93 693 - -
Lan1g1244 840 SUPERFAMILY Calcium ATPase, transmembrane domain M 142 660 IPR023298 -
Lan1g1244 840 ProSiteProfiles Heavy-metal-associated domain profile. 10 76 IPR006121 GO:0046872
Lan1g1244 840 CDD HMA 13 74 IPR006121 GO:0046872
Lan1g1244 840 Gene3D - 180 294 - -
Lan1g1244 840 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA4-RELATED 4 722 - -
Lan1g1244 840 SFLD p-type atpase 374 643 IPR044492 -
Lan1g1244 840 MobiDBLite consensus disorder prediction 739 825 - -
Lan1g1244 840 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 4 722 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1244 Lan-Chr1 22287740 22295583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1244 1 825 Primary Pumps ATPases AT4G30110 59.268 0.0 1016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1244 K01534 - gmx:100817567 1172.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1026 12 16931281 16938759 Lan1g1244 1 22287740 22295583 LSH