Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1242 ATGGAAGTAGCCTTCAAAGGTTGTTACACTGTAAGGCCAATTGAACCAACATGGTGTGGTCGCTTACCTTTATCTGAATGGGATCAAATAGGCACCATAACTCACGTGCCCACCATCTACTTTTATCGACCCTCACAAAACTCAACCAATGTTATTGCTGCCACCTTGAAAGACTCACTGAGCAGGGTCCTAGTGCCGTTTTATCCACTTGCTGGTCGTTTGCAATGGATTGGGAACGGTCGTTTTGAGCTTGAGTGCAATGGCACAGGAGTGCACTTCATTGAAGCTGAATCTTCATCAAATCTTGATGATCTTGGTGACTTTTCACCTTCTCCAGAATACAATTACCTCGTTCCAAGTGTGAACTATACCCTCCCTATTCATGAGTTGCCTTTGCTTTTGGTTCAGCTCACAATGTTCAAGTGTGGTGGCTTCAGCATCAGCCTAACAGTTTCACATGCAGTTGCTGATGGACCAAGTGCCTTACACTTCATTTCTGAGTGGTCAAGGTTTGCAAGATCAGGTGAGAGTATTTTGAAAACGGTGCCATTTCTTGATAGAAAAGTTTTACGTGCAGGGTTACCACCTTTGATGTCACTAGCACCATGCCATGCAAATTCAGCTTTCAATCACCCTCCTCTACTGCTAGGACAATCTGACAACATAGAAGAAAGGAAGAAGAAAACCACTGTGGCTATGTTAAAACTGAGCAAACACCAAGTAGAGATGTTAAGGAAGACAGCAAATGAGAGTTGGAGTAAGCCTAAGAATGACCGAAGTTACACACGGTATGAGACTGTAACCGGTCACATATGGAGAAGTGCATCTAAGGCAAGAGGGCATGAAAAGGATCAACCAACAGCTCTAGGTGTTTGTGTTGATTCAAGGAGTCGCATGCAACCTCCATTGCCAAAAGGGTACTTTGGAAATGCTACTTTGGATGTGATAGCTACTAGTCTTGCTGGTGATTTGATGTCAAGGCCATTAGGGTATGCTTCAAGCAGAATCAGGGAAGCTATTGACAAAGTAACTGATGAGTATGTAAGGTCAGGGATTGAGTTCTTGAAGAAGCAAGAAGATTTGACAAGGTTTCAAGATCTTCATGCAATAGGGAGTGACAATGGGCCTTTCTATGGAAACCCTAATCTTGGTGTAGTGAGTTGGTTAACTTTGCCAATATATGAACTTGATTTTGGGTGGGGGAAAGAGGTTTATATGGGTCCAGGGACACATGATTTTGATGGAGATTCTTTGATCCTTCCTGGTCCAGATCGAGATGGAACATTAGTTGTTGCTATATGTCTTCAAGTGATTCATATGGATGCATTTAAGAAGCATTTTTATGAAGATATTGTTGAAGAATCATTGGAAGATTGA 1377 0.4234 MEVAFKGCYTVRPIEPTWCGRLPLSEWDQIGTITHVPTIYFYRPSQNSTNVIAATLKDSLSRVLVPFYPLAGRLQWIGNGRFELECNGTGVHFIEAESSSNLDDLGDFSPSPEYNYLVPSVNYTLPIHELPLLLVQLTMFKCGGFSISLTVSHAVADGPSALHFISEWSRFARSGESILKTVPFLDRKVLRAGLPPLMSLAPCHANSAFNHPPLLLGQSDNIEERKKKTTVAMLKLSKHQVEMLRKTANESWSKPKNDRSYTRYETVTGHIWRSASKARGHEKDQPTALGVCVDSRSRMQPPLPKGYFGNATLDVIATSLAGDLMSRPLGYASSRIREAIDKVTDEYVRSGIEFLKKQEDLTRFQDLHAIGSDNGPFYGNPNLGVVSWLTLPIYELDFGWGKEVYMGPGTHDFDGDSLILPGPDRDGTLVVAICLQVIHMDAFKKHFYEDIVEESLED* 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1242 458 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 5 451 - -
Lan1g1242 458 Gene3D - 218 450 IPR023213 -
Lan1g1242 458 Gene3D - 1 204 IPR023213 -
Lan1g1242 458 Pfam Transferase family 2 449 - -
Lan1g1242 458 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 5 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1242 Lan-Chr1 22251538 22253343 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1242 1 449 Monolignol Biosynthesis Gene Families AT5G48930 40.444 5.49e-117 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1242 K13065 - gmx:100777007 705.286