Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1239 ATGGAAAAGCAACCATGTAAACGCCAACGTTTTCACTCACTGGAACCTAACAAAATAGTACAATATGAGTTTACTAGAAATTATGTCCACTATTTGGTTCCAGCTTTGATGGAGATAAAGGAAAAGAATAGTGCTAAGGGTAACATCCATTGTGATTTCAAGAATGTAGTTAAGCATGAAGTGGATTTGGCAATGGTATTCTCAGCCCAAGGTTTTGCATGGAGTAATGGCCTAAAACTCAAGCTTGAAAAGGATCATGCTAATGTAGCTACAAACACTACTAGCTTTGTAGAAAATGAGGCTGATGAAGGTAAGGACATGGAAGAAATGAAAGAGGATATAGCCATAGAAGAAAATGAAGATGAAGAGGACATCATGAAGAAGCAGTTGAGGAGCTTAAGAAGGTTGATACCTGGAGGAGAAGGAATATGTGATGAAGAAATGGTTGCTGAACTAGAAAGTTATATAAGCTGTTTGCAAATTCAGGTGAATGTTCTTCAATGTTTGCTAGCAGAAGCAAAGAAGGGTTGA 531 0.3766 MEKQPCKRQRFHSLEPNKIVQYEFTRNYVHYLVPALMEIKEKNSAKGNIHCDFKNVVKHEVDLAMVFSAQGFAWSNGLKLKLEKDHANVATNTTSFVENEADEGKDMEEMKEDIAIEENEDEEDIMKKQLRSLRRLIPGGEGICDEEMVAELESYISCLQIQVNVLQCLLAEAKKG* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1239 176 Coils Coil 116 136 - -
Lan1g1239 176 CDD bHLH_AtIBH1_like 126 170 IPR044549 GO:0006355
Lan1g1239 176 PANTHER TRANSCRIPTION FACTOR BHLH146 102 172 - -
Lan1g1239 176 PANTHER TRANSCRIPTION FACTOR BHLH146 2 99 - -
Lan1g1239 176 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 2 99 IPR044660 GO:0006355
Lan1g1239 176 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 102 172 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1239 Lan-Chr1 22235292 22236053 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1239 1 173 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 36.667 3.40e-23 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1239 - - aprc:113852314 191.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1239 1 22235292 22236053 Lan4g0119 4 1818507 1819226 PCT
Lan4g0119 4 1818507 1819226 Lan1g1239 1 22235292 22236053 PCT