Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1212 ATGCAGAGTCCAACAACCGATCCAAATAGTAACAGTAAGGGGAAAAGGTCATTGGAGGGTGGAGGAGAAGATGACCAGCCTGAACGAAAAAAGCCTGCTCTTGCTAGTGTAATTGTGGAAGCTCTCAAGGTGGACAGTTTGCAGAAACTTTGCTCATCTTTAGAACCTATTCTTCGTCGAGTTGTAAGTGAAGAAGTGGAGCGTGCTCTGGCAAAGTTTGGTCCTGCAAGACTCAGTGGAAGTACAAAATTTAGGTCTTCCCCAAAAACGATTGAAGGTCTAGATGGTAGAAACTTGCGGCTGCATTTTAAGTCCCGGCTGTCTCTTCCCCTGTTCACTGGAGGAAAAGTGGAAGGCGAGCAGGGGGCTCCTGTTCATGTTGTTCTGATTGATGCCAATACTGGATACATTGTAACATCTGGGCCTGAAGCCTACATGAAACTCGATGTTGTTGTCCTTGAAGGCGGTTTTAATAATGAAGATGATGAAGATTGGACTCAAGAAGAATTTGAAAGCCATTTGGTGAAAGAACGCGAAGGAAAGAGACCTTTGTTGACTGGCGAATTGCAAGTATCTCTCAAGGAAGGAATTGGAACATTGGGGGAACTGACTTTTACAGACAATTCAAGCTGGATAAGGAGCCGGAAGTTCAGGCTTGGCTTGAAGGTTGCACCAGGTTTTTGCGAGTCGTTACGCATTCGTGAAGCTAAGACAGATGCTTTCACTGTTAAAGATCATAGAGGAGAATTATATAAGAAGCATTATCCTCCTGCTTTGAGTGATGAAGTCTGGAGATTGGAGAAGATAGGCAAGGATGGGTCATTTCACAAGAAGCTGAATAATGCTGGAGTATTCACAGTTCAAGAATTTCTTCGGCTTGTGGTTAAAGATTCGCAAAAATTGCGGAATATCCTTGGGAGTGGTATGTCAAACAAGATGTGGGAAGTGCTCTTAGATCATGCAAAGACCTGTGTCCTAACTGGGAAGCTTTATGTTTATTATCCAGAAGATACGAGAATTGTTGGTGTTATTTTTAACAACATCTATGAGCTGCGTGGCCTTATAACAGGAGAACAATTCTTTTCTGCTGATTCGCTCACTGATAGCCAGAAGGTTTATGTAGATTCTTTGGTGAAGAAGGCATATGAAAATTGGGATCGGGTTATAGAGTATGATGGTAAATCACTCACAAGTGTTAGGGAAAATAATGTTGTAGCTGATAGTGAACTTCATATTGAGTCGGTGGATTACTCTAGTGGTTTGGATCATCAACTGCATCTGCCACTCCCCCCAGCACCTGTTCCTTCTGAACAGCAAACGAATTCAGGGATTTCAATTGGAGGTTATAATGATCATATGGTAACAAGATATCCAAGCCAGTCACCGATAGAAAATCTCAACTCATGTAACCAGTTTGATAGCTCTCTATATCTATCTAATGACCAATTAATCAACAGTGCCCAGCAAACCAAAACCACTAGAAATAGTCATGGTGCAGCTCTTGGTCCTCCTCAATCATCATCATCCTCGTCATCCTCATCATCACCAGGGTTTCATGTTGGCAGCTCTTCTATTCAATCATGTACTGTAAATCCTTTTGATGATTGGCCACACAACATGGACAAGGGGGTCAATGATTTTTTTTCAGAGGATGAAATCCGCCTCAGAAGTAATGAGATGCTAGAAAATGAAGATATGCAGCACTTGCTTCGCCTCCTCAGTATGGGAGCCCATTCCTCCGTGAATACTGAGGATAGCTATTCATTCCCATCATTCATGCCATCACCTATGCCAAACTTTGACGAGGGTCGCTCTCGTTCAGGCAGAGCTGTTGTGGGATGGCTGAAGATCAAGGCAGCAATGAGGTGGGGCTTTTTTATCCGGAAGATTGCAGCTGCAAAGCGGGCACAAATAGAGGAGTTAGATGAGTAA 1932 0.4312 MQSPTTDPNSNSKGKRSLEGGGEDDQPERKKPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKFGPARLSGSTKFRSSPKTIEGLDGRNLRLHFKSRLSLPLFTGGKVEGEQGAPVHVVLIDANTGYIVTSGPEAYMKLDVVVLEGGFNNEDDEDWTQEEFESHLVKEREGKRPLLTGELQVSLKEGIGTLGELTFTDNSSWIRSRKFRLGLKVAPGFCESLRIREAKTDAFTVKDHRGELYKKHYPPALSDEVWRLEKIGKDGSFHKKLNNAGVFTVQEFLRLVVKDSQKLRNILGSGMSNKMWEVLLDHAKTCVLTGKLYVYYPEDTRIVGVIFNNIYELRGLITGEQFFSADSLTDSQKVYVDSLVKKAYENWDRVIEYDGKSLTSVRENNVVADSELHIESVDYSSGLDHQLHLPLPPAPVPSEQQTNSGISIGGYNDHMVTRYPSQSPIENLNSCNQFDSSLYLSNDQLINSAQQTKTTRNSHGAALGPPQSSSSSSSSSSPGFHVGSSSIQSCTVNPFDDWPHNMDKGVNDFFSEDEIRLRSNEMLENEDMQHLLRLLSMGAHSSVNTEDSYSFPSFMPSPMPNFDEGRSRSGRAVVGWLKIKAAMRWGFFIRKIAAAKRAQIEELDE* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1212 643 PANTHER OS02G0177800 PROTEIN 7 642 IPR012416 GO:0005516
Lan1g1212 643 Pfam Calmodulin binding protein C-terminal domain 329 391 IPR046829 -
Lan1g1212 643 Pfam Calmodulin binding protein-like N-terminal domain 99 246 IPR046831 -
Lan1g1212 643 Pfam Calmodulin binding protein central domain 259 324 IPR046830 -
Lan1g1212 643 MobiDBLite consensus disorder prediction 17 31 - -
Lan1g1212 643 MobiDBLite consensus disorder prediction 429 449 - -
Lan1g1212 643 MobiDBLite consensus disorder prediction 1 31 - -
Lan1g1212 643 MobiDBLite consensus disorder prediction 1 16 - -
Lan1g1212 643 MobiDBLite consensus disorder prediction 488 523 - -
Lan1g1212 643 PANTHER CALMODULIN-BINDING PROTEIN 60 B 7 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1212 Lan-Chr1 22029982 22036700 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1212 9 638 Calmodulin-binding Proteins AT5G57580 63.820 0.0 812
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1212 - - gmx:100803029 975.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1057 12 17151659 17158038 Lan1g1212 1 22029982 22036700 LSH
Lan1g1212 1 22029982 22036700 Lan1g0357 1 2701309 2707728 LSH