Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1208 ATGGGATCTTCTATGAGTTGTTGTGGCACAGAGAAGGTCGAAGAAGTGCCAACATCATTTGGTGCAGTTAACAATTCATGGAGAATATTCTCATACAAGGAGTTGCATGCAGCAACTAATGGATTCAGTGAGGATAATAAACTTGGTGAAGGTGGTTTTGGAACCGTCTATTGGGGAACAACCAGTGATGGTTTCGAGATAGCGGTGAAGAAACTAAAAGCAATAAACTCAAAGGCGGAAATGGAATTTGCAATAGAAGTAGAAGTTCTTGGAAGAGTTAGGCACAAAAATTTACTAGGCCTTAGGGGCTATTGTGCTGGTGATGATCAAAGGCTTATAGTCTATGATTACATGCCAAATCTGAGCCTGCTTTCTCATCTCCACGGCCAATTTTCTCTTGAAGTTCAACTTGACTGGAAAAGGAGAATTAATATTGCAATTGGCTCCGCCGAAGGGATATTTTACTTGCACAATGAGGCAACACCCCACATAATCCATAGGGACATCAAGGCAAGTAATGTGCTTCTAAATTCAGATTTTGAGCCACAAGTTGCTGATTTTGGGTTTGCAAAGCTAATCCCAGAAGGAGTTAGTCACATGACTACCCGTGTTAAGGGCACATTGGGATACTTAGCACCTGAATATGCCATGTGGGGAAAAGTCTCTGAAAGTTGTGATGTCTTTAGCTTTGGAATTCTTCTATTGGAACTTGTAACTGGAAGAAAGCCCATAGAAAAACTCCCTGGTGGAGTTAAGAGAACAATAACTCAGTGGGCTGAGCCTTTTATAACCAAAGGAAAGTTTAGGGATATGGTTGACCCAAAACTTAGGGGGAACTTTGATGAAAATCAAGTTATACAAACAATCAATGTGGCTGCACTTTGTGTGCAAAGTGAGCCAGATAAGCGACCAAATATGAAGCAAGTGGTTAACCTTCTCAAAGGGTATGAAGCTGATAGAGAAGTGACTAGGACGAGGATACATAGTATTGTTTATAATGATGAACTATTGACACAGAATGAGCCTAGTGATGATGAGGGTGATGGAATTAATAACTATGGTGTTTTAAGTGCCATTGAGGTACAAAAAATGCATGATCCTCCTTACAAGCCTAGTGATAACAAGTATATGGTCTAA 1137 0.4028 MGSSMSCCGTEKVEEVPTSFGAVNNSWRIFSYKELHAATNGFSEDNKLGEGGFGTVYWGTTSDGFEIAVKKLKAINSKAEMEFAIEVEVLGRVRHKNLLGLRGYCAGDDQRLIVYDYMPNLSLLSHLHGQFSLEVQLDWKRRINIAIGSAEGIFYLHNEATPHIIHRDIKASNVLLNSDFEPQVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVFSFGILLLELVTGRKPIEKLPGGVKRTITQWAEPFITKGKFRDMVDPKLRGNFDENQVIQTINVAALCVQSEPDKRPNMKQVVNLLKGYEADREVTRTRIHSIVYNDELLTQNEPSDDEGDGINNYGVLSAIEVQKMHDPPYKPSDNKYMV* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1208 378 Pfam Protein tyrosine and serine/threonine kinase 45 313 IPR001245 GO:0004672|GO:0006468
Lan1g1208 378 Gene3D Phosphorylase Kinase; domain 1 14 117 - -
Lan1g1208 378 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Lan1g1208 378 PANTHER OS01G0750732 PROTEIN 1 372 - -
Lan1g1208 378 Gene3D Transferase(Phosphotransferase) domain 1 118 348 - -
Lan1g1208 378 ProSiteProfiles Protein kinase domain profile. 42 331 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1208 378 PANTHER PTI1-LIKE TYROSINE-PROTEIN KINASE 1 372 - -
Lan1g1208 378 ProSitePatterns Protein kinases ATP-binding region signature. 48 71 IPR017441 GO:0005524
Lan1g1208 378 SUPERFAMILY Protein kinase-like (PK-like) 25 335 IPR011009 -
Lan1g1208 378 CDD STKc_IRAK 48 315 - -
Lan1g1208 378 SMART serkin_6 42 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1208 Lan-Chr1 22002360 22004586 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1208 1 313 Trihelix Transcription Factor Family AT1G70460 47.484 2.99e-94 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Lan1g1208 PK_Tyr_Ser-Thr 1.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1208 - - gsj:114393039 636.336