Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1204 ATGCCTCCTCCTTCTTCCATTCATGGCGATCCTCATTCCAAACCAAACTCCAACCTTCTCTCCCTTTTCCTCAAACCAATCATCATGCTCCTCCTCACCTCCCTCTTCTTCCTCTTCATCGGTTTCGCCGCCTTCCTCCTCCTCCACGTCTTCCTCCTCGGCGGCGCCCTCCACCGCCTCCGCCATAACCCCACCCGCAACCTCAACAGCCTCCCGCGCTTCCGCGTCTCCAGGGGATCCGAACCCGCTCCCGAATCCCGTTGCGTTGTCTGCCTCGACGGATTTCGCAACGGCCAGTGGTGCCGGAAGCTCGCCGGTTGCGGCCACGTCTTTCACCGCCGATGCGTTGACACGTGGCTGGTTAAAGTCGCTGCTTGCCCTACTTGCCGTACACCTGTTCGATTCAATGCTGATGCGGATGCTCCAGTTCGGGATGATAGGCTATTTTGGAATTGCACCAATAACACTAACGCTATCACCATGTTATTATAG 492 0.5671 MPPPSSIHGDPHSKPNSNLLSLFLKPIIMLLLTSLFFLFIGFAAFLLLHVFLLGGALHRLRHNPTRNLNSLPRFRVSRGSEPAPESRCVVCLDGFRNGQWCRKLAGCGHVFHRRCVDTWLVKVAACPTCRTPVRFNADADAPVRDDRLFWNCTNNTNAITMLL* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1204 163 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 64 139 IPR013083 -
Lan1g1204 163 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 6 152 - -
Lan1g1204 163 SUPERFAMILY RING/U-box 84 136 - -
Lan1g1204 163 SMART ring_2 88 129 IPR001841 -
Lan1g1204 163 ProSiteProfiles Zinc finger RING-type profile. 88 130 IPR001841 -
Lan1g1204 163 Pfam Ring finger domain 87 130 IPR001841 -
Lan1g1204 163 PANTHER RING-H2 FINGER PROTEIN ATL56 6 152 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1204 14 134 C3H Transcription Factor Family AT2G18670 46.617 5.50e-29 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1204 - - gmx:102664895 209.149