Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1199 ATGGGGAATTCTAGCTTGGTCAAGCAAGAATTTCTCCGGAAATGGATAAGAGGTTTCAGAAAATATAGCTCACAAAAGAAGAACATGAACATGGTGGAGAGAAAGAAGGCCATAAAGCTATCAGCAGATGTAGCCATGGCTTCAACCAGAAACGAAACCACACGCTGGAGCCAGGCTCTTATTGCTAATGCTTCAAGAGACGGCAACAACAAAGTCCTCACAGAAAACATATTAGACTCATCTTCACAGCACTCGGAAAAGTTGGTAAGGAAAAACTTGATGAATTTGTCACCACTTTGTAGTAAAAGAGTTAGAAGCAGAAAAGTCTTGAGAAGAAGCCGTACAATGATTCATAAATCATCAAAGGAAAGGTTGATGACTAGTTCAATTGCTAAGAGGCTGAAGGTTCAAAAGAGAACACGAAGGCTCAAGAATTTGTTACCAGGTGGAGAATTTATGGATGATGTGTCTTTGGTTGAAGAAACCCTAGATTATATACAATCTCTGCGAGCTCAAGTTGAAGTTATGAGATGCCTTGTCACTGCCTCAGAGTTATTCATCAATCCATCATAA 573 0.3979 MGNSSLVKQEFLRKWIRGFRKYSSQKKNMNMVERKKAIKLSADVAMASTRNETTRWSQALIANASRDGNNKVLTENILDSSSQHSEKLVRKNLMNLSPLCSKRVRSRKVLRRSRTMIHKSSKERLMTSSIAKRLKVQKRTRRLKNLLPGGEFMDDVSLVEETLDYIQSLRAQVEVMRCLVTASELFINPS* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1199 190 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 5 182 IPR044660 GO:0006355
Lan1g1199 190 CDD bHLH_AtIBH1_like 136 180 IPR044549 GO:0006355
Lan1g1199 190 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 5 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1199 Lan-Chr1 21891539 21892806 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1199 1 184 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30410 43.243 1.27e-34 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1199 - - lang:109346753 295.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1078 12 17320552 17321860 Lan1g1199 1 21891539 21892806 LSH
Lan1g1199 1 21891539 21892806 Lan1g0337 1 2493809 2495225 LSH