Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1197 ATGGGTGGTCTAAGTGACCATCTTCCTGTAATAGGCATGATAGGGTTACAGATTCATTATGCAGCACTTGCAATTTTCACAAGAGCTGCTTTGTTAGATGGCTTGAGTCCCACGGTATTTGTAGTGTACAGACAAGGCATAGCCACCTTAACATTGGTCCCTATGGCTTTTTCCTCTAAGAGGAGACAATCTTTGAAGATTTCAATGGGATTAAGAAGCTTCTTCTTGATGTTTGCTACCTCTCTTATTGGAGTAACAGCAAATCAGAATGCATATTTTAAAGGTTTATATTATGCATCTTCCACTGCAGCTACTGCAATGAGTAATCTAATACCCGCATTAACTTTTATTATGGCAGCAATTGTTGGATTTGAGAAAATTGGTCTAAGAAGCTTAAGAAACATTGCCAAGATATTAGGAACAGTTTGTTGTGTCAGTGGAGCCTTAACCATGGCATTGCTCAAAGGACAAAAACTGTTACATATGGAGTTTGTTCCCTCTACATATCTCACTGCCAGTGAAAGTGATAATTGGCAACTAGGTTGTTTATTGCTCTTAGCAAGTAGTGTATTTTGGTCATGTTGGATGATCATGCAGGTACCAATTTCTTCATGCTGCCCAGATCATATATTATCCACCTTTTGGATGTGTTTCTTTGCAACTATACAATCAGCTATATTTGCACTGCTCTATGAGCAGAATCTTCAAGCATGGATTTTACATTCACCACTAGAATTTTCATGTTGTTTATATGCAGGAATTGGGATTGCAGTTAGCTTCTTTATTCAAACATGGTGCATATCAGAAAGAGGTCCTTTGTACTGTGCAATGTTCAATCCTCTAGCAACTGTCATAACAGCTTTGATAACTGTTACATTTATGCATGAAGAACTATATGTTGGAAGTTTGGTAGGAGCTATTGGAGTGATAGCTGGTTTATATATTGTACTTTGGGGTAAAGCCAAAGAGATTGAAGAGATTAAACAAGAGAAACAATCAAATTTGCAAGATGATAAGATAATTAGTAGTAGTATAGATTTGGAAGAACCACTTTTGTCAGAGAATTCAGAAAATGTAGCAGAGGCCAAGATTGAACCATGA 1101 0.3715 MGGLSDHLPVIGMIGLQIHYAALAIFTRAALLDGLSPTVFVVYRQGIATLTLVPMAFSSKRRQSLKISMGLRSFFLMFATSLIGVTANQNAYFKGLYYASSTAATAMSNLIPALTFIMAAIVGFEKIGLRSLRNIAKILGTVCCVSGALTMALLKGQKLLHMEFVPSTYLTASESDNWQLGCLLLLASSVFWSCWMIMQVPISSCCPDHILSTFWMCFFATIQSAIFALLYEQNLQAWILHSPLEFSCCLYAGIGIAVSFFIQTWCISERGPLYCAMFNPLATVITALITVTFMHEELYVGSLVGAIGVIAGLYIVLWGKAKEIEEIKQEKQSNLQDDKIISSSIDLEEPLLSENSENVAEAKIEP* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1197 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 215 321 - -
Lan1g1197 366 PANTHER WAT1-RELATED PROTEIN 9 342 - -
Lan1g1197 366 Pfam EamA-like transporter family 9 149 IPR000620 GO:0016020|GO:0016021
Lan1g1197 366 Pfam EamA-like transporter family 180 317 IPR000620 GO:0016020|GO:0016021
Lan1g1197 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 154 - -
Lan1g1197 366 PANTHER WAT1-RELATED PROTEIN 9 342 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1197 Lan-Chr1 21870696 21873876 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1197 1 356 Nodulin-like Gene Family AT4G30420 45.161 1.80e-115 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1197 - - gmx:100816384 557.37