Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1196 ATGTGTTTCTTTGCAACTATACAATCAGCTATATTTGCACTGCTCTATGAGCAGAATCTTCAAGCATGGATTTTACATTCACCACTAGAATTTTCATGTTGTTTATATGCAGGAATTGGGATTGCAGTTAGCTTCTTTATTCAAACATGGTGCATATCAGAAAGAGGTCCTTTGTACTGTGCAATGTTCAATCCTCTAGCAACTGTCATAACAGCTTTGATAACTGTTACATTTATGCATGAAGAACTATATGTTGGAAGTTTGGTAGGAGCTATTGGAGTGATAGCTGGTTTATATATTGTACTTTGGGGTAAAGCCAAAGAGATTGAAGAGATTAAACAAGAGAAACAATCAAATTTGCAAGATGATAAGATAATTAGTAGTAGTATAGATTTGGAAGAACCACTTTTGTCAGAGAATTCAGAAAATGTAGCAGAGGCCAAGATTGAACCATGA 456 0.3487 MCFFATIQSAIFALLYEQNLQAWILHSPLEFSCCLYAGIGIAVSFFIQTWCISERGPLYCAMFNPLATVITALITVTFMHEELYVGSLVGAIGVIAGLYIVLWGKAKEIEEIKQEKQSNLQDDKIISSSIDLEEPLLSENSENVAEAKIEP* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1196 151 SUPERFAMILY Multidrug resistance efflux transporter EmrE 6 106 - -
Lan1g1196 151 PANTHER WAT1-RELATED PROTEIN 1 128 IPR030184 GO:0016021|GO:0022857
Lan1g1196 151 PANTHER WAT1-RELATED PROTEIN 1 128 - -
Lan1g1196 151 Pfam EamA-like transporter family 2 102 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1196 Lan-Chr1 21870064 21871007 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1196 1 143 Nodulin-like Gene Family AT4G30420 47.403 3.24e-43 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1196 - - lang:109355245 289.656
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1196 1 21870064 21871007 Lan1g0335 1 2470499 2475481 LSH