Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1195 ATGGTTCGGTGCAGCAACAGCTTGATTGGTACACTGAATTTCTTGACCTTCCTTCTTTCCATTCCCGTCCTGTTTACCGGTATATGGCTCAGCAAGCAAGCCCACACCGAATGTGATCGATGGCTCGAAAGACCCATCATTGCATTTGGCGTCTTTCTGTTGCTGATTTCCCTCGCTGGCCTGATCGGAGCATGTTGCCATGTCAGGTGGCTCCTATGGTTATACCTGGTGGTCATGTTCATGTTCATCTTGCTCCTCTCTGCATTTAGCATCTTCGTTTTTGTTGTGACCATCAAAGGCGATGGGGAAGAGCTTTCGGGTAAAGGGTACAAGGAGTATAGGCTTGGCAATTACTCCATCATGTTGCAGAATAGAGTCAATAACCCCGTTGCATGGAACAGGATGAAGAGTTGTTTGCAGTCTAGTCAAATCTGCTTCCAATTCCAAAAACAATATGTCAAAGACAATGTTCACCAGTTCTACAACGAAAAGTTATCAGCTCTTCAGTCAGGATGTTGTAAGCCATCAAACGACTGTGGTTTCACCTATCAGAGTCCAACCAGGTGGATGAAAACAGGAAATGTGACTCATTCCAACCCTGATTGTGATGCTTGGAGTAATGATCCAAACATTATGTGCTTCAATTGTCAATCTTGCAAGGCTGCATTACTCCAAAACACAAAGACTGATTGGAGGAATGTGTCTATTGTCAATGCCATAATCCTCATCTTCCTCAGTATTGTTTACTCCATTGGTTGCTGTGCATTCAGGAATATCAAGAAGGACAATTGGAAGGGATATTAG 804 0.4378 MVRCSNSLIGTLNFLTFLLSIPVLFTGIWLSKQAHTECDRWLERPIIAFGVFLLLISLAGLIGACCHVRWLLWLYLVVMFMFILLLSAFSIFVFVVTIKGDGEELSGKGYKEYRLGNYSIMLQNRVNNPVAWNRMKSCLQSSQICFQFQKQYVKDNVHQFYNEKLSALQSGCCKPSNDCGFTYQSPTRWMKTGNVTHSNPDCDAWSNDPNIMCFNCQSCKAALLQNTKTDWRNVSIVNAIILIFLSIVYSIGCCAFRNIKKDNWKGY* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1195 267 PANTHER TETRASPANIN-8-RELATED 1 263 IPR044991 GO:0009734|GO:0016021
Lan1g1195 267 PRINTS Transmembrane four family signature 7 30 - -
Lan1g1195 267 PRINTS Transmembrane four family signature 39 65 - -
Lan1g1195 267 PRINTS Transmembrane four family signature 66 94 - -
Lan1g1195 267 Pfam Tetraspanin family 7 255 IPR018499 GO:0016021
Lan1g1195 267 PANTHER TETRASPANIN-8 1 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1195 Lan-Chr1 21866726 21869338 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1195 1 263 Miscellaneous Gene Families AT2G23810 57.795 2.17e-115 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1195 - - gmx:100819507 401.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1241 12 18387151 18388756 Lan1g1195 1 21866726 21869338 LSH
Lan1g1195 1 21866726 21869338 Lan1g0334 1 2467576 2470549 LSH