Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1180 ATGGCTTCCTCCTTACCAATTGTATCTCCAATATTCTTCATCATGTTGTCATTGCTGCTCTTAATTTCCTTGTGTGAAGGCTTTGATTTTGTAGTTGGAGGGAATAAAGATTCCTGGAAAGTTCCACTTCAGTCACCAGATTCGCTCAATCATTGGGCCGAGACCCAACGATTCAGGATCGGCGATACACTCGTGTTCAAATACAATAACAGCACAGAATCAGTGCACTTAGTGAATGAGGAGGACTATTTAGCATGCAAGACATTGGGGAATCACACAATATTCAATGATGGACATTCCAAGTTCCACCTTATGGAGTCAGGGTCATTTCACTTCATAAGTGGATCACAGGGTCATTGCCAAATGGGGTTAAAGCTAGTTGTAGTAGTCATGTCTCCTAGACCTGCTGTTAATGGAACCGTTCATTCGCCTCCTATCTCGCTTGCTCTACCTTCACCTGGACCCTCTGCACTCTCACCAAGTATTAATCAAGCTGTTCCACGCACTTCAGGCAATGAATTCATCTCAGTTATTATGGGTTTGGGGAGTTTCATTGGTCATATGATTATATTTGAGTTAATGTAA 585 0.4222 MASSLPIVSPIFFIMLSLLLLISLCEGFDFVVGGNKDSWKVPLQSPDSLNHWAETQRFRIGDTLVFKYNNSTESVHLVNEEDYLACKTLGNHTIFNDGHSKFHLMESGSFHFISGSQGHCQMGLKLVVVVMSPRPAVNGTVHSPPISLALPSPGPSALSPSINQAVPRTSGNEFISVIMGLGSFIGHMIIFELM* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1180 194 PANTHER EARLY NODULIN-55-2 14 183 - -
Lan1g1180 194 CDD OsENODL1_like 28 131 IPR041846 -
Lan1g1180 194 SUPERFAMILY Cupredoxins 27 131 IPR008972 -
Lan1g1180 194 ProSiteProfiles Phytocyanin domain profile. 28 132 IPR003245 GO:0009055
Lan1g1180 194 Gene3D - 28 141 IPR008972 -
Lan1g1180 194 Pfam Plastocyanin-like domain 39 123 IPR003245 GO:0009055
Lan1g1180 194 PANTHER BLUE COPPER PROTEIN 14 183 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1180 Lan-Chr1 21773302 21774722 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1180 15 163 Phytocyanin Superfamily AT2G25060 38.926 2.01e-32 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1180 - - gmx:100784860 169.088