Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1174 ATGGGTGACAAGGGTAGAATCAACAGTGAGGGTCAAATTCAGTCAACATTGGTCCATGGAAAATACGAGCTAGGTCGACTTCTAGGTCATGGAACCTTCGCGAAGGTGTACCATGCAAGGAACATTGGAACTGGAAAAAACGTTGCCATGAAGGTTATAGGGAAAGAGAAAGTTATCAAAGTTGGAATGATGGAACAGATGAAGAGAGAGATCTCAGTTATGAAGATGGTGAAGCACCCAAACATTGTTCAACTACATGAAGTCATGGCTAGCAAATCCAAGATCTACATCGCTATGGAACTCGTTCGAGGCGAGGAGCTTTTCAACAAGGTCGTTAAAGGACGGTTAGGAGAAGATGTGGCTAGGTTATATTTTCAGCAGTTGATCTCAGCCATCGATTTCTGCCACAGCCGCGGCGTTTACCACCGCGACCTGAAGCCGGAGAATCTCCTCCTCGACGAAGATGGGAACCTTAAAGTCTCTGATTTTGGTCTCAGTGCCTTCTCGGAGGAGCATTTGAGGCAAGATGGGTTGTTGCACACCACATGCGGAACTCCGGCGTACGTTTCGCCGGAGGTGATTGCGAAGAAAGGGTACGACGGTGCAAAAGCAGATCTATGGTCTTGTGGAGTCATATTATATGTTCTTCTCGCTGGGTTCTTACCCTTTCAAGATGAAAATTTGATGGTTATGTATAAGAAGATTTACAAGGGTGATTTCAAGTCTCCACCATGGTTCTCTTCAGAAGCAAGAAGACTCATCACTAAGCTTCTCGACCCAAACCCTAATACCCGTATTACCATATCCAAGATAATGGACTCATCTTGGTTCAAAAAACCAATACCTCAGAGTTTGATGAGGAAGAAGAAGGAAGAGAATGAGTTGTTTGATTTTGAGGAGAAGGACAACAAGTGTGAGATATCTAAGACTATGAATGCTTTTCATATAATCTCTTTATCTGAAGGGTTTGATTTGTCACCGTTGTTTGAGGAGAAGAAGAGGGTGGAGAGGGAGGAGATGAGGTTCGCAACGGCGGGGACACCGAGCAGCGTGATATCAAGGTTGGAGAAGGTGGCGAAGGCGGTGAAGTTCGACGTGAAGAGTAGTGACACAAAGGTGAGGCTACAAGGGCAAGAACGTGGAAGGAAGGGAAAGTTGGCAATTGCGGCGGATATATACGCCGTAACGCCGTCGTTTATGGTGGTGGAGGTTAAGAAAGATAATGGTGATACTTTGGAGTATAATCAGTTCTGTAGTAACAAGCTTCGTCCTGCACTCAGAGATATTTTATGGACTTCTCCTCCTGAGAATTCATCAATACCATCTTGA 1329 0.45 MGDKGRINSEGQIQSTLVHGKYELGRLLGHGTFAKVYHARNIGTGKNVAMKVIGKEKVIKVGMMEQMKREISVMKMVKHPNIVQLHEVMASKSKIYIAMELVRGEELFNKVVKGRLGEDVARLYFQQLISAIDFCHSRGVYHRDLKPENLLLDEDGNLKVSDFGLSAFSEEHLRQDGLLHTTCGTPAYVSPEVIAKKGYDGAKADLWSCGVILYVLLAGFLPFQDENLMVMYKKIYKGDFKSPPWFSSEARRLITKLLDPNPNTRITISKIMDSSWFKKPIPQSLMRKKKEENELFDFEEKDNKCEISKTMNAFHIISLSEGFDLSPLFEEKKRVEREEMRFATAGTPSSVISRLEKVAKAVKFDVKSSDTKVRLQGQERGRKGKLAIAADIYAVTPSFMVVEVKKDNGDTLEYNQFCSNKLRPALRDILWTSPPENSSIPS* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1174 442 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 14 439 - -
Lan1g1174 442 Gene3D Phosphorylase Kinase; domain 1 6 100 - -
Lan1g1174 442 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Lan1g1174 442 CDD CIPK_C 312 427 - -
Lan1g1174 442 SMART serkin_6 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1174 442 Pfam NAF domain 309 367 IPR004041 GO:0007165
Lan1g1174 442 SUPERFAMILY Protein kinase-like (PK-like) 18 288 IPR011009 -
Lan1g1174 442 CDD STKc_SnRK3 21 276 - -
Lan1g1174 442 PANTHER - 14 439 - -
Lan1g1174 442 ProSiteProfiles NAF domain profile. 306 330 IPR018451 GO:0007165
Lan1g1174 442 ProSiteProfiles Protein kinase domain profile. 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1174 442 Gene3D Kinase associated domain 1, KA1 306 432 - -
Lan1g1174 442 ProSitePatterns Protein kinases ATP-binding region signature. 28 55 IPR017441 GO:0005524
Lan1g1174 442 Gene3D Transferase(Phosphotransferase) domain 1 101 281 - -
Lan1g1174 442 Pfam Protein kinase domain 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1174 Lan-Chr1 21729384 21731162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1174 9 435 CBL-interacting serine-threonine protein kinases AT4G30960 73.611 0.0 621
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lan1g1174 Pkinase 7.1e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1174 - K07198 gmx:547644 702.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1101 12 17494849 17496599 Lan1g1174 1 21729384 21731162 LSH