Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1155 ATGGGGAAGAAAAAGAAGCATGTAGGAGAAACAAGTGAACATAATGGAAATCAAAGCAAAGTGGGAGATAGAAGCCATGAAGCATATGAAAAAACATCTATATCCATTTCTCAAGAGTTGAAGGGTGAGGGAAACAAGTTGTTTTGTAAGAGGGACCTTGAAGGAGCATTAATAAAATATGAGAAAGCCCTTACATTGCTTCCGAAAAATCATGTAGATGTGTCCAATCTGCGGAGTAGCATGGCTGCATGCTACATGCAGATGGGACTGAGTGAGTATCCGAGGGCAATTCATGAATGCGATTTGGCCCTCAAAGTAACTCCAAATTATAGTATAGCTCTGTTGAAGAGGGCAAGGTGCTTTAAGGATTTAAATAGGATTGATTTAGCTCTGAGAGATGTTAGAACTGTTGTGAAGATGGAGCCAAATAATGTTACGGCATTGGATCTTTACGAAAATGTGAAAAATGCACTTGAGGAGAAAGGGTTAAGAGTAAGTGATATGACAATTGAGTTGCCTCTGGATTATGTTGAGCCTCCTACTACTTTGCCTCCACAAAAGGTAGTGAAAGAGAAGACTCGAAAGAAAAAGACCAATAAAAAGGAAGAGAAGGTGCTTGGCAACAAAATCCCAAAGAAGCAAGCTGAGGAGAAATTTGAAGAGAAGAAGGCTGAGGATAGTATTATGAAAAAGACCAATATATTCAAAAAGAAGGCTACGGAAAAAATTGATGAGAAGAAGGCTGATATTAAAGAAGCTGTAGATGAAAAAAGTAATGGCAGAAGGGGAAATGTACCTAAGAAAACCGCAAAACTTATTTTTGGTGAGGATATAAGATGGGCTGAATTGCCTGTTAATTGCAGCCTCTTGCAGCTAAGAGAAATTATTTGTGACCGATTCCCAAGCCTACGAGCTGTTCTTGTCAAGTACAGAGACCAAGAAGGTGATTTGGTTACAATCACTTCTGATGAAGAATTAAAATTGGCCGGAGCAGGAAATCAGGGTTCTTTCCGGCTGTATCTAGTCGAAGCTACTCCTGAGCAGGATCCAATGTTTGAGAAACTTAAAGTAAACACGGGGGAGGAGTTTCGGATTAATAATGAACCTGAGAATGGTTGCATGGTAAAAGCCAATGAAATTATTACCCCATCGTGCATTGAAGATTGGGTCATCCTGTTTGCCAAACTGTTCGAGAACAATGTTGGATTTGAATCTGACAGATATTTGGATTTTCATGAACTTGGGATGGAGCTTTCTTCTGAGGCTCTGGAGGAGGTAGTTACAAGTAAAGAAGCACAAGGCGTGTTTGACATGGCCGGAGATAAGTTCCAGGAGATGACTGCTCTAGCATTGTTCAACTGGGGAAACATTCATATGTCTAGGGCAAGGAAGAAAGTATATTTCAAAGATGATTATTCTAAAGAACATCCATGCGAACAATTCAAAAGTTCGTATGAATGGGCACAAAAAGAATATGCAAAAGCAGGAGAAAAATATGAAATGGCCATTAAAATTAAGTCAGATTTTTATGAAGCCTTCGTGGCACTGGGGCAGCAGCAGTTTGAGCAAGCAAAACATTCTTCGTATTATGCACTCAGCAATGATATAGATTTAGCGACATGGCCCTCCCATGAGGTTCTTCGGCTTTACAACAATTCAGACGATAATATGAAGAAAGGAATGCTGATATGGGAAGAATTAGAAAAGCAATGCTTGGGAAAAACATCTTATTCAAAGGATGTTAGATTACATTTACAGAGCACGGGGTTGGATCGGATGATTAAAACTATATCATCAGATGACATTGCTGCACAGGCGACAAATATTAGATCTCAAATAAATCTCCTGTGGGGTACCATGCTATATGAACGTTCGATTGCAGAGTTCAAATTTCAGCTACCGGTTTGGCATGAGTCTCTGCAAGTTGCAATTAAGAAGTTTGAACGTGCCGGAGCTTCTCCAACTGATATAACTGTAATGTTGAAGAACCACTGTTCAAACAATACTGCAGTAGATGGCCTAGGATTCAAAATCGATGAAATATTACAGGCATGGAATGAGATGTATGAAGCTAAAAGGTGGCAGAGTGGAATTCCATCATTTCGTTTGGATCCCTTATTTAAAAGGCGAGTTCCGAAAGTATATAATGCATCCGAGCCTGCATGA 2166 0.3966 MGKKKKHVGETSEHNGNQSKVGDRSHEAYEKTSISISQELKGEGNKLFCKRDLEGALIKYEKALTLLPKNHVDVSNLRSSMAACYMQMGLSEYPRAIHECDLALKVTPNYSIALLKRARCFKDLNRIDLALRDVRTVVKMEPNNVTALDLYENVKNALEEKGLRVSDMTIELPLDYVEPPTTLPPQKVVKEKTRKKKTNKKEEKVLGNKIPKKQAEEKFEEKKAEDSIMKKTNIFKKKATEKIDEKKADIKEAVDEKSNGRRGNVPKKTAKLIFGEDIRWAELPVNCSLLQLREIICDRFPSLRAVLVKYRDQEGDLVTITSDEELKLAGAGNQGSFRLYLVEATPEQDPMFEKLKVNTGEEFRINNEPENGCMVKANEIITPSCIEDWVILFAKLFENNVGFESDRYLDFHELGMELSSEALEEVVTSKEAQGVFDMAGDKFQEMTALALFNWGNIHMSRARKKVYFKDDYSKEHPCEQFKSSYEWAQKEYAKAGEKYEMAIKIKSDFYEAFVALGQQQFEQAKHSSYYALSNDIDLATWPSHEVLRLYNNSDDNMKKGMLIWEELEKQCLGKTSYSKDVRLHLQSTGLDRMIKTISSDDIAAQATNIRSQINLLWGTMLYERSIAEFKFQLPVWHESLQVAIKKFERAGASPTDITVMLKNHCSNNTAVDGLGFKIDEILQAWNEMYEAKRWQSGIPSFRLDPLFKRRVPKVYNASEPA* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1155 721 SUPERFAMILY CAD & PB1 domains 269 354 - -
Lan1g1155 721 CDD PB1 271 341 - -
Lan1g1155 721 Gene3D - 250 343 - -
Lan1g1155 721 MobiDBLite consensus disorder prediction 1 28 - -
Lan1g1155 721 SMART tpr_5 37 70 IPR019734 GO:0005515
Lan1g1155 721 SMART tpr_5 111 144 IPR019734 GO:0005515
Lan1g1155 721 SMART tpr_5 75 110 IPR019734 GO:0005515
Lan1g1155 721 SUPERFAMILY TPR-like 36 158 IPR011990 GO:0005515
Lan1g1155 721 Coils Coil 236 256 - -
Lan1g1155 721 SMART PB1_new 267 344 IPR000270 GO:0005515
Lan1g1155 721 PANTHER PROTEIN PHOX3 3 719 - -
Lan1g1155 721 ProSiteProfiles PB1 domain profile. 267 344 IPR000270 GO:0005515
Lan1g1155 721 Pfam PB1 domain 269 329 IPR000270 GO:0005515
Lan1g1155 721 Gene3D Tetratricopeptide repeat domain 27 167 IPR011990 GO:0005515
Lan1g1155 721 PANTHER PROTEIN CLMP1 3 719 IPR044517 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1155 Lan-Chr1 21563504 21567954 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1155 - - lang:109354753 1382.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1155 1 21563504 21567954 Lan1g0270 1 1984507 1987826 LSH
Lan1g1155 1 21563504 21567954 Lan15g0248 15 2800523 2804669 PCT
Lan1g1155 1 21563504 21567954 Lan3g0930 3 20393460 20398135 PCT
Lan15g0248 15 2800523 2804669 Lan1g1155 1 21563504 21567954 PCT
Lan3g0930 3 20393460 20398135 Lan1g1155 1 21563504 21567954 PCT