Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1124 ATGTCTAGCTGCAGTGTTGATGTTGGTCTTGAGCAACTTTGCTACATCCCTTGCAAGTTCTGCAACATTGTTCTTGCGGTGAGTGTTCCATGCAGTAGCTTGTTTGACATCGTGACCGTTCGATGTGGTCACTGCACCAATCTATGGTCCGTGAACATGGCCTCTGCGTTTCAGTCTATGTCATGGCAAGATGTTCAGGCACCTACTCATTTTAATCATCCAGAGTATAGAATTGACACCAGTGGCTCCACTTCCAAATGCAACAACAGAATTGCAATGCGTGCACCCACCACACATGTTACTGAGGAAAGGGTTGTGAACCGACCTCCCGAGAAGAGGCAGCGTGTACCTTCTGCTTATAATCAGTTCATAAAGGAAGAGATTCAGAGGATCAAGACCAATAACCCTGATATCAGTCACAGAGAAGCATTCAGTACTGCTGCAAAGAACTGGGCACATTTTCCCAATATTCACTTTGGGTTGATGTTGGAGAGCAACAACAATCAAGCTAAGATGGAGAACGTTTCTGACAAGCATTTGATGTCAACGCTATTGAACAAATGA 564 0.4468 MSSCSVDVGLEQLCYIPCKFCNIVLAVSVPCSSLFDIVTVRCGHCTNLWSVNMASAFQSMSWQDVQAPTHFNHPEYRIDTSGSTSKCNNRIAMRAPTTHVTEERVVNRPPEKRQRVPSAYNQFIKEEIQRIKTNNPDISHREAFSTAAKNWAHFPNIHFGLMLESNNNQAKMENVSDKHLMSTLLNK* 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1124 187 PANTHER PROTEIN YABBY 6-RELATED 1 179 IPR006780 GO:0007275
Lan1g1124 187 Gene3D High mobility group box domain 100 157 IPR036910 -
Lan1g1124 187 PANTHER AXIAL REGULATOR YABBY 5 1 179 - -
Lan1g1124 187 SUPERFAMILY HMG-box 105 155 IPR036910 -
Lan1g1124 187 Pfam YABBY protein 11 161 IPR006780 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1124 Lan-Chr1 21283266 21286998 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1124 8 172 C2C2-YABBY Transcription Factor Family AT2G26580 73.939 5.23e-86 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Lan1g1124 YABBY 1.9e-68 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1124 K25796 - gmx:100804731 337.035
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1158 12 17890539 17894136 Lan1g1124 1 21283266 21286998 LSH