Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1121 ATGGTACAATCAAGAAAGTTCAGAGGTGTCAGGCAGCGTCATTGGGGTTCTTGGGTTTCCGAAATTCGGCACCCTCTTTTGAAAAGGAGGGTGTGGCTAGGTACATTTGAAACAGCAGAAGAAGCAGCACGAGCTTATGATCAAGCTGCCATTTTGATGAGTGGTAGAAACGCCAAAACAAATTTCCCAATAACCCAAACACCCGAAGGTGACCCAAAGATTATGAGTAACAACGATGGCACAACTTCTTCCACCTCGAAGGATCTAGAAGAGATTCTACATGCTAAGCTTCGAAAATGTGGCAAGGTACCTTCTCCTTCCATGACATGTTTGAGGCTTGACACTGAGAATTCTCACATTGGAGTGTGGCAAAAGCGTGCTGGGCAAGGTTCTGATTCAAATTGGGTTATGACTGTTCAACTGGGGAAAAAGAAGAGTAACACCAATGAGGGTGGTGAAGATAGTAGTAGTTCTCTACCTTCTTCTACTTCTACTTCTTCTGAACATAATAATAATTATCAGTTTAAACCAGCAATAGTGGCAGTTCATGATCAGGAACAAGTGCAGGTGAAGACACAAATGAATGAAGAAGATAGAATTGCCCTACAAATGATTGAAGAGCTCCTTAATAGGAACTGTCCTAGCCCTTCAACCCTTAACAATAAGGAACACGGAGATGATGCCAGCTTTTTTCTTTAA 699 0.422 MVQSRKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFETAEEAARAYDQAAILMSGRNAKTNFPITQTPEGDPKIMSNNDGTTSSTSKDLEEILHAKLRKCGKVPSPSMTCLRLDTENSHIGVWQKRAGQGSDSNWVMTVQLGKKKSNTNEGGEDSSSSLPSSTSTSSEHNNNYQFKPAIVAVHDQEQVQVKTQMNEEDRIALQMIEELLNRNCPSPSTLNNKEHGDDASFFL* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1121 232 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Lan1g1121 232 MobiDBLite consensus disorder prediction 61 85 - -
Lan1g1121 232 Gene3D AP2/ERF domain 5 65 IPR036955 GO:0003700|GO:0006355
Lan1g1121 232 MobiDBLite consensus disorder prediction 144 171 - -
Lan1g1121 232 SUPERFAMILY DNA-binding domain 6 64 IPR016177 GO:0003677
Lan1g1121 232 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
Lan1g1121 232 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Lan1g1121 232 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Lan1g1121 232 Pfam AP2 domain 6 54 IPR001471 GO:0003700|GO:0006355
Lan1g1121 232 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 1 218 - -
Lan1g1121 232 CDD AP2 6 65 IPR001471 GO:0003700|GO:0006355
Lan1g1121 232 PANTHER AP2-EREBP TRANSCRIPTION FACTOR 1 218 - -
Lan1g1121 232 MobiDBLite consensus disorder prediction 213 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1121 Lan-Chr1 21261016 21262341 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1121 1 212 AP2-EREBP Transcription Factor Family AT1G15360 57.078 3.73e-75 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lan1g1121 AP2 1.3e-12 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1121 1 21261016 21262341 Lan1g0226 1 1631295 1632226 LSH