Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1109 ATGGCCACCGCCATATATGAACGTGAAGCCGACTATGACAGCAGTTCCTCCTCCATCACCGTCCCAGAATCAAGCCGGAGCTGGATGAGCAACCTCAGCTTCAGCAGCCGCCGCCGCCGAAGCTCAGTCTCCGTCTATTCCTCCACCACAGACACCAACACCAAGCCACACAAGGCAAACCAAGTTGCATGGGAGGCCATGCAGCGGCTCCGCCTCGACAAGGGCCACCTTGGACTGGAGCACTTCCGCCTCCTGCGGCGGCTGGGTAGCGGCGACATAGGGAACGTTTACCTTTGTCAAATAAGGAACCCAGTGGTAGGGTTACCACAGTGCTTCTATGCCATGAAAGTGGTGGATAGAGAAGCACTTGCTATAAGGAATAAGTTGCATAGAGCTGAAATGGAGAAAGAGATTTTGGGTATGCTTGATCATCCTTTCTTGCCAACTTTGTATACTGAGTTTGATGCTTCTCATTACTCTTGTTTCCTTATGGAGTTCTGTCCCGGTGGTGACTTATATGCTGCACGCCACCGCCAACCAGGGAAGCGCTTTACCCTTGCTTCCGCTAAGTTTTATGCAGCTGAGACACTTTTGGCCTTAGAGTATCTCCATATGATGGGCATAGTGTATAGGGATTTGAAGCCAGAGAATGTGCTGGTAAGGGAAGATGGTCACATTATGCTTTCAGATTTTGATCTTTCTCTCAAATGTGACGTTGTTCCAAAGCTACTAAGGAGTAAAACCAGGTCAGAGAGAAGTATCAAGAGCATAAAGAGATCTACACCTTCTTGCACTGCCCCCATGCAGCCTGTGATATCATGTCTTTTAGGCAAGAAAAAGAAACCAACAGTGACAACAGTTATAAGAGAAAATGTTACTATTGAAGACCAAGAACTTGATCCAGAGCTAGTTGCTGAACCTATTGATGCTAGGTCCAAGTCATTTGTAGGGACACATGAGTATTTAGCACCAGAAGTGATTTTGGGACAAGGGCATGGGAGTGCAGTGGATTGGTGGACATTTGGTGTGTTCTTGTATGAAATGTTAAATGGAAGAACACCATTCAAAGGTGAAAATAATGAGAAAACACTGATAAACATTCTCAAGCAACCATTGGCTTTTCCTAGAATAGCAGTTAGTAGCAGCAAGGAGTATGAAGAGATGGTGAAAGTTCAAGACCTTATAAGCAAGCTTTTAGTGAAGAATCCAAATAAGAGAATTGGTAGTTGCATGGGTTCTGTTGAGATCAAAAGGCATGAGTTCTTCAAAGGTGTAAATTGGGCTCTAATTAGATCGGTTAAGCCCCCTGAGGTCCCTAATGATATGAACAAGGTTAGAACTAGTAGGGTTTTGATACCAAAACTAAGCAAAAAAGATAGGGATCAACCATTTCAGCTTACTCATAGTTTTGAATACTTCTAA 1422 0.4459 MATAIYEREADYDSSSSSITVPESSRSWMSNLSFSSRRRRSSVSVYSSTTDTNTKPHKANQVAWEAMQRLRLDKGHLGLEHFRLLRRLGSGDIGNVYLCQIRNPVVGLPQCFYAMKVVDREALAIRNKLHRAEMEKEILGMLDHPFLPTLYTEFDASHYSCFLMEFCPGGDLYAARHRQPGKRFTLASAKFYAAETLLALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLSLKCDVVPKLLRSKTRSERSIKSIKRSTPSCTAPMQPVISCLLGKKKKPTVTTVIRENVTIEDQELDPELVAEPIDARSKSFVGTHEYLAPEVILGQGHGSAVDWWTFGVFLYEMLNGRTPFKGENNEKTLINILKQPLAFPRIAVSSSKEYEEMVKVQDLISKLLVKNPNKRIGSCMGSVEIKRHEFFKGVNWALIRSVKPPEVPNDMNKVRTSRVLIPKLSKKDRDQPFQLTHSFEYF* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1109 473 PANTHER PROTEIN KINASE PINOID 2 1 473 - -
Lan1g1109 473 Gene3D Transferase(Phosphotransferase) domain 1 167 236 - -
Lan1g1109 473 Gene3D Phosphorylase Kinase; domain 1 80 166 - -
Lan1g1109 473 SMART serkin_6 82 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1109 473 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Lan1g1109 473 Gene3D Transferase(Phosphotransferase) domain 1 309 440 - -
Lan1g1109 473 CDD STKc_phototropin_like 81 439 - -
Lan1g1109 473 ProSiteProfiles Protein kinase domain profile. 82 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1109 473 PANTHER FLIPPASE KINASE 1-RELATED 1 473 - -
Lan1g1109 473 SUPERFAMILY Protein kinase-like (PK-like) 61 445 IPR011009 -
Lan1g1109 473 Pfam Protein kinase domain 312 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1109 473 Pfam Protein kinase domain 83 237 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1109 Lan-Chr1 21185856 21188016 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1109 7 473 AGC Kinase Gene Family AT2G26700 58.779 0.0 584
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lan1g1109 Pkinase 6.3e-30 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1184 12 18019029 18020946 Lan1g1109 1 21185856 21188016 LSH