Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1107 ATGGAGGACAGAAAAGTGATCACTATTGCTGCTGTGTCAGTGATTATACTGTTCATAGTTATCATAGTTGCTCGTGTTTCATTGAAGTTGTCTAAGGCCTTCTTCCTCATTCTTGGTGCTGATGTTGCTGTAATCCTTGCTGTGTTTTCATGTGTGTTAATCAGACAACGTTACAAAACTAGGAGGAATTTGATGGAGTCAAGGTTGAGATCAGAAGGCAGAGAACTTAGAATAGAGTACAGTTTCCTAAGAAAAATTGCTGGTGTTCCAACAAAGTTTCGATACAAGGAGCTTGAAGAAGCAACAAATGGGTTTCAAGCACTTATAGGAAAAGGGTCATCTGCTTCAGTCTTCAAAGGAATTCTGAAAGATGGTACTTCAGTAGCTGTGAAAAGAATTGATGGTGAAGAAAGGGGTGAAAGAGAGTTCAGATCAGAAGTTGCAGCTATTGCTGGTGTTCAACATGTTAACCTTGTGAGACTATATGGTTATTGCAATGCTCCTTCAGCTCCTAGGTACCTTGTTTATGAGTATGTTCCAAATGGTTCTTTGGATTGTTGGATTTTTCCTTCAAATGATTTAACTAATAGGCGTGTTGGTGGGTGCTTGCCATGGAATTTGAGGTATAGAGTGGCAATTGATGTTGCTAAGGGACTTAGTTACCTTCAACATGATTGTAGATCAAGAATCTTACACCTTGATGTGAAGCCAGAAAATATACTTTTAGATGAGAGTTATAGAGCACTTGTTTCTGATTTCGGTCTCTCGAAGCTTGTTGGAAAAGATGTGAGCAGAGTTATGACTAACATTAGAGGAACAAGGGGGTATTTAGCACCTGAGTGGCTCTTAGAGATGGGAGTTTCTGAGAAAACTGATATCTATAGCTATGGGATGGTTCTGTTGGAGATAATTGGAGGGAGAAGGAATGTGTCAAGGGTAGAAGATCCAAAGGATAAGTCTAAGAAAAAATGGCAGTTTTTTCCAAAGATTGTGAATGAGAAAGTTAGAGAAGGCAAGTTTATGGAAATTGTGGATCATAGGCTAATAGAGATAGGGGATGTTGATGAAAGTGAAGTGAAAAAATTGGTGTATGTTGCTTTGTGGTGCATACAAGAGAGGCCAAGATTGAGGCCTAGCATGGCACAAGTTGTTGATATGCTTGAAGGGCGTGCTAGGTTGGATTTGCCACCTGATACTAGAATGATTCTTGTTGATTTGTTATCTGTGGATGAAGATCCTGCAACAGATAATAATAATCTGGCAAGGTTATTGACCTCTTTGTCTAGTCATGGAGATAATAATATATCTGCTTACTCAATGGGAGGAACCACTGTTTTATCTGGCAGGTAG 1350 0.3933 MEDRKVITIAAVSVIILFIVIIVARVSLKLSKAFFLILGADVAVILAVFSCVLIRQRYKTRRNLMESRLRSEGRELRIEYSFLRKIAGVPTKFRYKELEEATNGFQALIGKGSSASVFKGILKDGTSVAVKRIDGEERGEREFRSEVAAIAGVQHVNLVRLYGYCNAPSAPRYLVYEYVPNGSLDCWIFPSNDLTNRRVGGCLPWNLRYRVAIDVAKGLSYLQHDCRSRILHLDVKPENILLDESYRALVSDFGLSKLVGKDVSRVMTNIRGTRGYLAPEWLLEMGVSEKTDIYSYGMVLLEIIGGRRNVSRVEDPKDKSKKKWQFFPKIVNEKVREGKFMEIVDHRLIEIGDVDESEVKKLVYVALWCIQERPRLRPSMAQVVDMLEGRARLDLPPDTRMILVDLLSVDEDPATDNNNLARLLTSLSSHGDNNISAYSMGGTTVLSGR* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1107 449 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 1 449 - -
Lan1g1107 449 SMART serkin_6 103 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1107 449 SUPERFAMILY Protein kinase-like (PK-like) 85 388 IPR011009 -
Lan1g1107 449 ProSitePatterns Protein kinases ATP-binding region signature. 109 131 IPR017441 GO:0005524
Lan1g1107 449 Gene3D Phosphorylase Kinase; domain 1 68 178 - -
Lan1g1107 449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 230 242 IPR008271 GO:0004672|GO:0006468
Lan1g1107 449 ProSiteProfiles Protein kinase domain profile. 103 393 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1107 449 Pfam Protein kinase domain 108 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1107 449 Gene3D Transferase(Phosphotransferase) domain 1 179 394 - -
Lan1g1107 449 PANTHER RECEPTOR-LIKE KINASE 1 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1107 Lan-Chr1 21173682 21175416 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1107 1 399 Receptor kinase-like Gene Family AT5G20050 67.082 0.0 519
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Lan1g1107 Pkinase 2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1107 - - gmx:100779485 682.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1107 1 21173682 21175416 Lan1g0207 1 1528867 1529573 LSH