Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1101 ATGGCGTTTATTATTTTCTTCTTCCTTTCACTTCTTCAACTCAGTTCCCGATTCAACTCGGAGCCAACTCAGGACAAAAAAGCCCTCATCGCTTTCATTTCACAAACCCCACACTCTTACCGTCTCAAATGGAACGTTTCTGACTCCGTTTGTAACTGGGTCGGAGTCCAATGCGATTCAACTAATTCCTCCGTCTATTCACTCCGTTTACCCGGTGTTGATCTCGTGGGTCGGGTCCCACCCGATTCAATTGGCCGTCTCACTCAGCTTCGGATTCTGAGTCTCCGTTCTAACGCTCTCACTGGTCAAGTTCCTTCCGATTTCTCTAACCTCAAATTTCTTCGAAGTCTTTATCTTCAAAATAACCGATTTTCCGGCGAGTTTCCACTGAGTCTGACTCGGCTAACTCGTTTAAATCGTTTGGTTCTCTCATCTAATAACTTCAACGGCACAATTCCTTTCGCTATAAACAATTTAACTCGTCTCACTGGTTTGTTTTTGGAGAATAACACCTTCTCCGGTGAAATTCCAAGCATTACTATCAAATTGGTTAACTTTGATGTTTCAAATAACCGTTTAAACGGTTCCATTCCTGAATCATTGTCGAAATTCCCTGCGTCTTCTTTTGCGGGAAATTTAGATCTATGTGGTGGACCTTTGCAGCCATGTGAACAAAATTTTCCGGCACCGGCGCCGTCGCCGGAGTCTACAGTTCCGTCGAGCCTGGTGCATCAGAAGTCTAAGAAGCTTTCAACTGGTGCCATTATTGGAATTGTTGTAGGTTGTGTTGCCGGTGCGTTGTTATTGCTTCTGCTTGTGTTGTTTTGTTTACGGAAACGGAAGCGGCGGCAACCACCGAAGTCGCCGAAGCCAGTGGCAACGGCGGCACGTAGTGTCCCTACGGCGGAGGCAGGAACGTCGTCGTCTAAGGATGAAATAACGGGTGGTTCAATGGAAAGTGAGAGGAACAAGTTGGTGTTTTTGGAAGGAGGGATATACAATTTCGATTTGGAGGATCTGCTTCGTGCTTCGGCGGAGGTGTTAGGGAAAGGGAGCGTGGGAACTTCGTATAAGGCGGTGCTAGAGGAAGGGACGACGGTGGTGGTGAAGCGGTTGAAAGATGTGGTGGTTACGAAGAAAGAGTTCGAAATGCAAATAGAGATATTGGGGAAGATTAAACATGAGAATGTGGTTCCTCTTAGAGCTTTCTACTTTTCCAAAGATGAGAAATTGCTTGTTTATGATTACATCACTTCTGGTAGCCTCTCTGCTCTTCTTCACGGGAGCAGAGGGTCTGGGAGAACGCCATTAGGCTGGGAAAACAGAAGGAGAATAGCATTAGGGACCGCAAGAGGGGTTGCATGCCTCCACGTGTCAGGCAAGGTGGTCCATGGCAACATCAAATCTTCCAATATACTCCTCCGAGGGCCCGACAACGATGCAAGCGTTTCGGATTTTGGCCTCAACCCATTGTTTGGCAATGGAGGCCCATCCAACCGCATTGCAGGTTATCGTGCCCCAGAGGTATTAGAGACTCGTAAGATGACGACTTTCAAGTCTGATGTTTACAGCTTTGGAGTGTTGTTGTTGGAGTTATTAACCGGTAAGGCACCCAACCAAGCATCACTGGGTGAAGATGGCATTGATCTTCCAAGGTGGGTCCAGTCAGTGGTTCGCGAAGAATGGACAGCCGAGGTGTTCGACGCCGAGCTCATGAGGTTCCACAACATAGAGGAGGAGATGGTTCAGCTGTTGCAGATTGCAATGACTTGTGTTTCAGTGGTGCCTGATCAGAGGCCAAGTATGCAGGAAGTGGTGCACTTGATTGAGGGCATGAATAGGGGAGAGACTGATGATGGTTTAAGACAATCCTCTGATGACCCTTCTAAAGGTTCTGAGGGTGAGTCAAGGACACCACCTAGGTCCACACCTTAA 1935 0.4749 MAFIIFFFLSLLQLSSRFNSEPTQDKKALIAFISQTPHSYRLKWNVSDSVCNWVGVQCDSTNSSVYSLRLPGVDLVGRVPPDSIGRLTQLRILSLRSNALTGQVPSDFSNLKFLRSLYLQNNRFSGEFPLSLTRLTRLNRLVLSSNNFNGTIPFAINNLTRLTGLFLENNTFSGEIPSITIKLVNFDVSNNRLNGSIPESLSKFPASSFAGNLDLCGGPLQPCEQNFPAPAPSPESTVPSSLVHQKSKKLSTGAIIGIVVGCVAGALLLLLLVLFCLRKRKRRQPPKSPKPVATAARSVPTAEAGTSSSKDEITGGSMESERNKLVFLEGGIYNFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVVVTKKEFEMQIEILGKIKHENVVPLRAFYFSKDEKLLVYDYITSGSLSALLHGSRGSGRTPLGWENRRRIALGTARGVACLHVSGKVVHGNIKSSNILLRGPDNDASVSDFGLNPLFGNGGPSNRIAGYRAPEVLETRKMTTFKSDVYSFGVLLLELLTGKAPNQASLGEDGIDLPRWVQSVVREEWTAEVFDAELMRFHNIEEEMVQLLQIAMTCVSVVPDQRPSMQEVVHLIEGMNRGETDDGLRQSSDDPSKGSEGESRTPPRSTP* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1101 644 Pfam Leucine rich repeat 66 124 IPR001611 GO:0005515
Lan1g1101 644 Pfam Leucine rich repeat N-terminal domain 23 59 IPR013210 -
Lan1g1101 644 Gene3D Transferase(Phosphotransferase) domain 1 417 630 - -
Lan1g1101 644 ProSiteProfiles Protein kinase domain profile. 342 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1101 644 PANTHER OS05G0480400 PROTEIN 7 630 - -
Lan1g1101 644 MobiDBLite consensus disorder prediction 612 644 - -
Lan1g1101 644 MobiDBLite consensus disorder prediction 612 634 - -
Lan1g1101 644 Pfam Protein kinase domain 345 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1101 644 Gene3D Phosphorylase Kinase; domain 1 309 416 - -
Lan1g1101 644 MobiDBLite consensus disorder prediction 283 317 - -
Lan1g1101 644 MobiDBLite consensus disorder prediction 300 314 - -
Lan1g1101 644 Gene3D Ribonuclease Inhibitor 22 181 IPR032675 -
Lan1g1101 644 Gene3D Ribonuclease Inhibitor 183 223 IPR032675 -
Lan1g1101 644 SUPERFAMILY Protein kinase-like (PK-like) 346 607 IPR011009 -
Lan1g1101 644 PANTHER OS05G0588300 PROTEIN 7 630 - -
Lan1g1101 644 SUPERFAMILY L domain-like 36 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1101 Lan-Chr1 21123979 21126891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1101 2 630 Receptor kinase-like Gene Family AT5G58300 52.025 0.0 609
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lan1g1101 Pkinase 1.3e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1101 - - gmx:100806857 938.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1192 12 18067409 18070835 Lan1g1101 1 21123979 21126891 LSH
Lan1g1101 1 21123979 21126891 Lan1g0193 1 1392447 1396216 LSH