Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1092 ATGTATTCCTCAAATAGCTTCATCAACAGCAATGACCTAATCTCCTACCCTATTCAATTTTACTCCTCTAGGCCTTTTTCCATTGAAAGCAACCCAACACAATTAGAAACACCCAATACATCATGTGCCCTTGTTTCTCCTCCTTTGTCCTTTTTTCATTTCCCTTCTCTCTTTGAAGAAGACCAACATGATATTTTCCTTGAACAATATCAGCATCACTTACTTAATCACCAACAATCTATAAATGAGGCTGAGAAAGTTAATGTTAACATGGAGAATATTAGTATTATTGCTGATCATAAAGCAGGACAAGGTACTGATCCTCAGATCCCAATAAGAAGATCTAGCAAGGGAGATCGGCATAGTAAGATTAAAACAGCTAAAGGGTTGAGGGATCGAAGAATGAGATTGTCTCTTTTAGTTGCAAAGAGGTTTTTTGGTCTACAAGACATGCTAGGTTTTGATAAAGCAAGCAAAACTGTGGATTGGTTGTTGAATCAAGCAAAAGTTGAGATCAAGAAGGTGGCAAGAGAGAAGAATATTCATCATCATCATCATCATCATCATGTGAAGAGTGCATCTTCGACTTCGGAATGTACTGAAGCTGTGTCAAGCTTGGATGAGGTTGCAGTGAGCGGAAATCATCAGAAACATATTAAGGGAGTAACAAAGAGAAGAAGAGTTAAGGTTTGTAGAAAGATTGCATTCAAGCATATTGGTAAGGAATCAAGGGAAAAGGCAAGAGAAAGAGCAAGAGAAAGGACCAAACAGAAGATGAGGTCTCAGTTTCTAGCTGAACCTGATAAATCAAAGCAATGTGAAGAGGCAACAAATGATAATCTTCTCAGTTTAGGTTCTTGCTGGAATCCCTTTGAAACTGTTGAAGGGTGTGCAGGTACTCAAAGCCAAAGTGTTGATCCCTCTTGGGATGTGATAAATGAGGTTGAAGAACGAAACTCTCAAGGGATGGAGCATTTGAGAACTGAAGAAGGTATAGAGCAAGAAGATTCTTTGGTGATTATGAGCAAATGGAGCCCAACCACGATTTTCAATTATTCCTTGACTAACTCAGGAATCCTTCAAGAGCATCATTTTTCAGAATTTCAATCCATGGGAAAACCTTGGGAGCCTTACAACAATCACAACATCTAA 1152 0.3863 MYSSNSFINSNDLISYPIQFYSSRPFSIESNPTQLETPNTSCALVSPPLSFFHFPSLFEEDQHDIFLEQYQHHLLNHQQSINEAEKVNVNMENISIIADHKAGQGTDPQIPIRRSSKGDRHSKIKTAKGLRDRRMRLSLLVAKRFFGLQDMLGFDKASKTVDWLLNQAKVEIKKVAREKNIHHHHHHHHVKSASSTSECTEAVSSLDEVAVSGNHQKHIKGVTKRRRVKVCRKIAFKHIGKESREKARERARERTKQKMRSQFLAEPDKSKQCEEATNDNLLSLGSCWNPFETVEGCAGTQSQSVDPSWDVINEVEERNSQGMEHLRTEEGIEQEDSLVIMSKWSPTTIFNYSLTNSGILQEHHFSEFQSMGKPWEPYNNHNI* 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1092 383 Coils Coil 67 87 - -
Lan1g1092 383 ProSiteProfiles R domain profile. 241 258 IPR017888 -
Lan1g1092 383 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 59 344 IPR005333 GO:0003700
Lan1g1092 383 PANTHER TRANSCRIPTION FACTOR TCP18 59 344 - -
Lan1g1092 383 Pfam TCP family transcription factor 116 261 IPR017887 -
Lan1g1092 383 MobiDBLite consensus disorder prediction 102 122 - -
Lan1g1092 383 ProSiteProfiles TCP domain profile. 117 175 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1092 Lan-Chr1 21041304 21043279 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1092 92 279 TCP Transcription Factor Family AT3G18550 42.029 1.15e-30 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lan1g1092 TCP 7.3e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1092 - - lang:109345082 466.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1092 1 21041304 21043279 Lan1g1092 1 21041304 21043279 ECH
Lan12g1201 12 18137977 18139913 Lan1g1092 1 21041304 21043279 LSH
Lan1g1092 1 21041304 21043279 Lan1g0181 1 1277928 1279989 LSH