Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1087 ATGGGTGGTGGAAGGAAGAGAAGGCATCACTTTGGAAAAATCCATTCATTTGCGCGTGGAAAAGCTACTTTGAAAGATGAAGAACATTCACTTATAGGAGGCCCTGGCTTCTCAAGGAAAGTATATATAAATGACCCTGAAAGATTTGAGTCAAATCTTCTGAATTATGGTGATAATTATGTGAAGACTACTAAATATACACTTGCCACTTTTATTCCCAAGTCCTTGTTTGAACAATTCAGAAGGGTTGCCAATTTCTACTTCCTTGTGGTAGCAATTTTGTCATTCTTACCTGTTTCACCATACTCAGCTGTTAGTAATGTTGTTCCTCTTGTTATTGTGGTTGCTGCTTCAATGGGCAAAGAGTTACTCGAAGATTGGAAGCGAAAAACACAGGATATAGAGATCAATAACAGAACGGTCAAAGTACATCGCGAAGGTGGTGTTTTCGACTTGTCTAAATGGAGGGATTTGAGAGTTGGAGACATAGTTAAGGTGGAAAAAGATCAATTTTTCCCTGCTGATCTCATCTTACTTTCATCGAGTTATGACGACGCGATTTGCTATGTTGAGACAATGAATCTTGATGGAGAAACAAATCTTAAACTCAAACAAGCACTGGAAGGAACTTCGAAGTTTCAAGAAGACTCGAGCTTTGGAAATTTCAAGGCTATCATCAAATGTGAAGATCCGAATGCAAATTTGTATGCTTTTGTAGGAAGTCTTGACCACGAGGATCAGCAGCAGCCTCTTGCGCCTCAGCAGCTACTGCTTAGGGACTCGAAGCTGAGGAATACAGATTTTATCTTTGGCGCGGTAATCTTTACTGGTCATGATACTAAGGTTATGCAGAACTCAACAGAGCCTCCATCGAAGAGAAGCAAAATTGAGAAACGGATGGATAAGGTTATCTACTGCTTGTTCTTTCTCTTATGTCTGATTTCCATTATTGGTTCCATATTCTTTGGAATTTCAACAAAGGATGATCTTGAAAATGGAAAAATGAAGAGATGGTATCTTAGACCAGATGATTCAACAATTTACTATGATCCAAAGAACGCGGCAGTTGCAGCACTTCTGCATTTCTTGACAGCGGTTATGTTGTATGGCTATTTCATTCCGATTTCATTGTATGTCTCAATTGAAATTGTGAAAGTTCTTCAAAGCATTTTCATCAACGGGGATATCCACATGTATTATTCGGAAACTGACCAGCCAGCGCATGCTCGCACGTCAAATTTGAACGAAGAACTTGGGCAAGTTGAGACCATACTTTCAGATAAAACAGGAACTTTGACTTGCAATTCTATGGAATTTATCAAGTGTTCTATTGCTGGCGTGTCTTATGGACGAGTAGCTACAGAAGTTGAGAGAGCTCTATCCGGGAGAACAGATTCATCTTTCGGTCAAAAGTTGAAAGGAGACAACAACATTGCAACGCCAGCTATTAAAGGGTTTAACTTTCAGGATGAAAGGATCATGAATGGAAATTGGGTCAAAGAACCCAATAGCAATGTAATCCAGAACTTCCTACGGTTGTTGGCTATATGCCACACTGCAGTACCTGAAGTTGATGAGAAAACTGGCAAAATCTCATATGAAGCTGAATCACCAGATGAGGCAGCTTTTGTGATTGCAGCCAGAGAACTCGGGTTTGAGTTTTACGAAAGGACACATACAACTACTTCATTTCGTGAATTAGATCCAAAATCCGCGAAGAAAGCTCAAAGGTCCTACAAACTTTTAAATATACTAGAGTTTAGTAGCGCAAGAAAGCGTATGTCTGTAATTGTAAGAGACGAGGAGGGGAAACTACTACTACTTAGCAAAGGCGCTGACAGTGTCATGTTTGAACGCCTAGCAAAGAATGGAAGGGAGTTTGAAGAAAAGACTAAGCAGCACATTAGTGAATATGCTGACTCTGGTCTGAGGACCTTAATACTCGCATACCGTGAACTTGACGAGGAAGAGTACAGTCGATTTAATAAGGAATTCACAGAGGCCAAAAACTCAGTGAGTGCGGATCAGGAGCGGATTGTAGAGGAAATATCTCAAAATATTGAGAAGGACTTGATTCTTCTTGGAGCTACTGCTGTTGAAGACAAACTTCAAAACGGGGTTCCTGAATGCATCGACAAACTAGCACAGGCTGGGATTAAGCTATGGGTTTTGACTGGCGATAAAATGGAGACTGCAATCAATATCGGATTTGCTTGTAGTTTACTCAGACAAGGAATGAAACAGATTATAATTAGCTCAGAAACTCGAGAAACTAAATCTCTGGAGAACATGGAGGACAAGTCTGCTTCTGAAGCGGCACTCAAGGCAAGTGTTCTTCGTCAAATAAAGGCCGGAAAGGCATTACTTTCTACATCCGACGAAAACTCTGATGCGCTAGCGCTAATTATTGATGGGAAGTCTCTTACTTATGCGCTGGAAGATGATGTCAAAGACTTGTTTCTTGAACTTGCTGTTGGCTGTGCATCTGTTATATGCTGTCGTTCATCTCCCAAGCAGAAAGCACTTGTTACTAGACTGGTTAAGATTAAAACTGGTAAGACAACTCTAGCGATTGGAGATGGTGCAAATGACGTTGGAATGCTCCAAGAAGCGGACATTGGGATTGGTATCAGTGGTGTTGAAGGAATGCAGGCAGTTATGTCAAGTGATATTGCAATTGCCCAATTTCGGTTTCTAGAGCGCCTACTTCTCGTGCATGGACATTGGTGCTACAGAAGGATCTCATCAATGATCTGCTACTTCTTCTACAAGAACATCGCCTTCGGCTTCACTCTATTCTTCTATGAGATGTATGCCTCATTCTCCGGGCAACCTGCATACAACGATTGGTGCATGTCACTATATAACGTATTCTTCACTTCACTTCCCGTAATCGCTTTGGGAGTGTTTGATCAGGATGTTTCTTCTAAACTATGCCTCAAGTTCCCCTTATTATATCAAGAAGGTATGAAAAATGTCCTATTTAGCTGGAAAAGAATCTTTGGTTGGGCATTCAATGGTGTTGTGAGTGCTGCAATTATATTCTTCTTTTGCATTCGCGCGATGGAGCATCAAGCATTCCGAAAAGATGGCGAAGTTGTCGGGCTGGAAGTTCTTGGTACTACCATGTACACTTGTCTTGTATGGGTGGTGAATTGTCAAATGGCATTATCTATAAGTTACTTCACTTACATACAACATATTTTCATATGGGGTAGTATTCTATTCTGGTACATATTCCTCATGATATATGGAATCATTGACCCATCATTTTCAACCACGGCTTATGAGGTTTTCATTGAAGCTCTTGCACCAGCACCATCTTTCTGGTTCATAACTTTATTTGTTGTTATTTCTTCTCTTCTTCCTTATTTCGCCTATGCTTCCATCCAATTCCGGTTCTTCCCGGTCTTTCATCAAATGATACAATGGATAAGAAATGATGGGCAAACAAATGATCCAGAATTCTGTAATGTGGTGAGACAGAGATCAATAAGACACACAACAGTTGGATTCACAGCACGTTTGGAAGCATCAAGGCGTTTTGAAGCATCCAAAGGATTTGAAGCACCCTTTGAAGTGATCTCTGATAGCAGATAA 3600 0.4058 MGGGRKRRHHFGKIHSFARGKATLKDEEHSLIGGPGFSRKVYINDPERFESNLLNYGDNYVKTTKYTLATFIPKSLFEQFRRVANFYFLVVAILSFLPVSPYSAVSNVVPLVIVVAASMGKELLEDWKRKTQDIEINNRTVKVHREGGVFDLSKWRDLRVGDIVKVEKDQFFPADLILLSSSYDDAICYVETMNLDGETNLKLKQALEGTSKFQEDSSFGNFKAIIKCEDPNANLYAFVGSLDHEDQQQPLAPQQLLLRDSKLRNTDFIFGAVIFTGHDTKVMQNSTEPPSKRSKIEKRMDKVIYCLFFLLCLISIIGSIFFGISTKDDLENGKMKRWYLRPDDSTIYYDPKNAAVAALLHFLTAVMLYGYFIPISLYVSIEIVKVLQSIFINGDIHMYYSETDQPAHARTSNLNEELGQVETILSDKTGTLTCNSMEFIKCSIAGVSYGRVATEVERALSGRTDSSFGQKLKGDNNIATPAIKGFNFQDERIMNGNWVKEPNSNVIQNFLRLLAICHTAVPEVDEKTGKISYEAESPDEAAFVIAARELGFEFYERTHTTTSFRELDPKSAKKAQRSYKLLNILEFSSARKRMSVIVRDEEGKLLLLSKGADSVMFERLAKNGREFEEKTKQHISEYADSGLRTLILAYRELDEEEYSRFNKEFTEAKNSVSADQERIVEEISQNIEKDLILLGATAVEDKLQNGVPECIDKLAQAGIKLWVLTGDKMETAINIGFACSLLRQGMKQIIISSETRETKSLENMEDKSASEAALKASVLRQIKAGKALLSTSDENSDALALIIDGKSLTYALEDDVKDLFLELAVGCASVICCRSSPKQKALVTRLVKIKTGKTTLAIGDGANDVGMLQEADIGIGISGVEGMQAVMSSDIAIAQFRFLERLLLVHGHWCYRRISSMICYFFYKNIAFGFTLFFYEMYASFSGQPAYNDWCMSLYNVFFTSLPVIALGVFDQDVSSKLCLKFPLLYQEGMKNVLFSWKRIFGWAFNGVVSAAIIFFFCIRAMEHQAFRKDGEVVGLEVLGTTMYTCLVWVVNCQMALSISYFTYIQHIFIWGSILFWYIFLMIYGIIDPSFSTTAYEVFIEALAPAPSFWFITLFVVISSLLPYFAYASIQFRFFPVFHQMIQWIRNDGQTNDPEFCNVVRQRSIRHTTVGFTARLEASRRFEASKGFEAPFEVISDSR* 1200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1087 1199 Pfam Phospholipid-translocating P-type ATPase C-terminal 886 1136 IPR032630 -
Lan1g1087 1199 Pfam Phospholipid-translocating ATPase N-terminal 41 106 IPR032631 -
Lan1g1087 1199 Gene3D - 695 898 IPR023214 -
Lan1g1087 1199 ProSitePatterns E1-E2 ATPases phosphorylation site. 427 433 IPR018303 -
Lan1g1087 1199 SUPERFAMILY Calcium ATPase, transmembrane domain M 47 1136 IPR023298 -
Lan1g1087 1199 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 56 1143 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Lan1g1087 1199 CDD P-type_ATPase_APLT_Dnf-like 58 1018 - -
Lan1g1087 1199 SFLD Haloacid Dehalogenase 407 909 - -
Lan1g1087 1199 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 825 940 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Lan1g1087 1199 SFLD p-type atpase 407 909 IPR044492 -
Lan1g1087 1199 Pfam Cation transport ATPase (P-type) 527 620 - -
Lan1g1087 1199 PRINTS P-type cation-transporting ATPase superfamily signature 425 439 - -
Lan1g1087 1199 PRINTS P-type cation-transporting ATPase superfamily signature 858 877 - -
Lan1g1087 1199 SUPERFAMILY Calcium ATPase, transduction domain A 138 285 IPR008250 -
Lan1g1087 1199 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1181 - -
Lan1g1087 1199 Gene3D - 121 287 - -
Lan1g1087 1199 SUPERFAMILY HAD-like 420 913 IPR036412 -
Lan1g1087 1199 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 432 696 IPR023299 GO:0000166
Lan1g1087 1199 Gene3D - 540 694 IPR023299 GO:0000166
Lan1g1087 1199 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1087 Lan-Chr1 20979482 20985677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1087 10 1184 Primary Pumps ATPases AT3G25610 69.550 0.0 1749
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1087 K01530 K14802 gmx:100796405 2005.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1087 1 20979482 20985677 Lan1g1087 1 20979482 20985677 ECH
Lan1g1087 1 20979482 20985677 Lan1g0167 1 1187385 1193230 LSH