Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1047 ATGGTACTCCTCACAAAGTTGTTCTACCGGAAGCACCCCAATCATCTTCTTCAAATCTCTCACAAAATTTATGTTTTTGATTGCTGCTTCTCCAATGTTGTATTGGATGAAGATGAGTACAGAGCTTATATGGGAGGAATTGTGGCTCAGCTTCAGGATCACTTCCCAGATGTTTCTTTCACGGTATTTAACTTCAAAGAAGGGAACAAACGCAGCCAAATATCGGACATACTTTCTCAGTATGACATGACAGTGGTGGAATATCCTCGGCAATACGAGGGTTGTCCACTTCTTCCTTTGGAGGTGATCCATCACTTTCTTCGATCAAGTGAAAGCCGGTTGTCTATGGAGGGGCAACAAAATATGCTTTTGATGCATTGTGAAAGGGGAGGTTGGTCCATGCTGGCGTTTATGCTAGCAGGTCTTCTGTTATACCGGAAACAGTACACTGTGGAGCAGAAGACTCTTGAAATGATCTACAAGCAAGCCCCCAGAGAACTTTTCCACCTTTTAACTCCGTTGAACCCGCAACCTTCTCAGTTAAGATATCTTCGGTATATTTCCAGGAGACATTTGGGTTCCGAGTGGCCCCCATCAGATACACCCTTGTATTTGGATTGTATGATTCTTAAAAATCTTCCATCATTTGATGAAGGAAAAGGTTGCAGGCCTGTCGTACGTGTTTATGGTCCAGACCCTTCGAAACCTGCCAATAGAAGAAGTTCAAAGCTTATTTTTTCAACTCCAAAATCCAAAAAACATATTCACCATTACTCACAGGCAGAGTGTATGCTCGTGAAAATTGATATCCGTTGTCATGTTCAAGGGGATGTTGTTCTTGAGTGCATACATTTAAATGAAGATTTTAATCGTGAGGTGACGATGGTTAGAGTCATGTTCCATACTGCATTTGTGCAGTCAAATATATTGATGCTGAACCGCGATGACATTGATATTTTGTGGTATGCAAAGGATCAATTTCCCAAGGACTTCAAAGCAGAGGTGCTTTTTTTGGATAATGATGCTGTTATACATGATCTAACCACAGTCGATGTGAGTAAAGATGCAAATGAGACTGAAAGTGTTTCATCTGAGAAATTGTATCAAGTGGCAGATATTTTCAGCAATGTAATTGATGCACGAGAAGGAAAGGAGGAGTATGATTCTCTTGCTTTCCATGACAATGCAGTGGGCGACGGAAATTATAACGAGGCCTGGAAAGAGAAGGTGGACCATCATGCTTTAGATGAGGGGAATAACAAACAGGTTGACAAAATGGATACTGGTATTAAGGTGAAAGACATATTTGTTGATGATGTGAAGTACAGGATCAACGAAAGCGTGGATCCAAATAATGATGCAGTGAAAGACATTGCTGTGGATGAAGGAGAAAATAAGTCAAATTCTACTGCATTGGCTTCTAGTAAAATTCTGGAAACAACTGAAGTCACCTTCGACGTGCATGGGGAATTGACACTTGAGCAAAACAAATATGACGAAGATGACAAAGCAACAGAAATGGAATTCGATCCCAAGGCTGCGAAGCAGATGTCTGCTCTTTCCAGACTTAAATCTGGTAAGTTACGTCTATCTTCTACAAAGAAACAACTTCCATCAAACTCAAGGCCTTTGGGAGATACAGTTTCAGCAAAACCGAAGATTAAACAGCAAGAATCACAAAGTTTTCAGGTAAAACAAGCTAAGCCGAATGCAGTAACTAGGTGGGTTCCTTCTAACAAAGGTTCTTACACAAGTTCAATGCATGTCTATTACCCGCCATCAAGGATTAATAATGCACCAGCTGCTCTGCCAAAATGTATTGCTTCAAAGGAGAAAATGGAAGATTTCAAAGGAAGATCTTTATTTGCTCCTGCTGTTTCTATCGACATGACAAATTACCTGAAAAGTCGTAAGGTGGCCACATCAAAATCTTCAGGCCACATAGTACCCGAAGCAGATGCAAACTGTCCACCATCATCGTTACTGTCAATTAAAGAAACATCTCTTCAGTCAGCTAGTAAAACACAAGAAGTGAGCTCAGAGAAAGTGCTACGGCCTCCTCCACCGCCTCCACCTCCGCCTCCATCCCCTGCCAGAAACTCTTCTTTCGATGCTTTTGAACATTTATCATTACAGGATGATGCATCACCTCTTGCCCTGGCATCGCCACTAGTGTCACCATCTTCCTCTTTAGGTGGAAAGGTATCTACTGCACCTCAGCCACCGCCAACTTTAATATCATTTACTGAACAAAAAGTCGGGGCGAATTTACAATCTAAAACTTCTCGTCCTCCCCCTCCATCCTCATTTTTTGGGCAAAATAAAGGGAGTGGTCTACCTTCTCCGTCTTCTTGGAAGTCTGTCTATTCATCAATTGCCATAATTGAAGAGAGTAGAGGTTCTCTTCCACTTTCCTCATCCTTCAGTGAAAATTTATCAAAACTTTCTGAAGTGCTTACTGTAACAGCCACTCCTCCACCTCCACCACCACCATTGCCTCCTCCAAGGTACGAAGTTTCATCGATTCCTCCTTCTCCAACACCAACATCAGCAGCAACTCCTCCAAAGCGTGGAATTCCCGCTCTGCATACATTTTCCACACATAGGACTTCTCCCCCTCCTTCTCCACCACTTCCAACTGCATCACATAAAGCTCCATCAGCACCCCCTCCGCCCCCACCTCCACCACCGCCACCTCCTTATAGTAGTACTCTACCACCACCATTTCCTCCCTTTAGTAAAGCCCCACCGCCACCACCTCCACCACCACCATCACCTCCTTATAGTACTACTCCACCACCACCATGTCCTCCCTTTAGTAAAGCCCCATCGCCACCACCTCCACCTCCTTATAGAATTGCTGCTCCACTAGCACCACCTCCTCCTTTTAGTAAAGCTCCACTGCCCCCGCCTCCACCTCCACCTCCTTATAGTAGTGCTCCACCACCTTCTCCTTTCAGTAAAGCTCCTCCGCCACCACCTCCCCCTCCTTACAGCAGTGTTCTGTCGCCACCACCACCTCCTTTTAGTAAAGCTCCCCCACCACCGCTGCCACCTCCTCCATTAAGTGGAGCTCCATCTCCACTTCCACCTCCTCCATTAAGTAGAGCTCCACCACCACCACCTCCACCTCCTCCAATGTCTAGAGCCCCACCACCACCTCCTCCAATGTCTAGAGCCCCACCTCCTCCGCCCTCGCCTGGTGGTCGAGGACCACCTCCTCCACGCCATCCTGGTGGTCGAGGACCGCCTCCTCCTCCTGGTGGTGCACCTCCAGCCAAAGGTGCAAATGTTGGAGGTGATCTAAAATTGAGAGGGCGTGGTGGATATTCACGCTCGGCAGGAGCTGGTGCAATGTCACCCAAGAGATCCCTTTTCAAGCCTCTACATTGGAGTAAGGTTACAAGGGCTTTGCAAGGAAGTTTATGGGAAGAACTTCAAAGACATGCAGAACCTTATATTGCACCCGAGTTTGATGAATCAGAGTTAGAGAAGCTTTTCTCTGCAAATGTTGCAAAACCTGCTCATTCTAAAACAACAGCGCGGCGTAGATCTCTTGAATCTAAAACAGACAAAGTCCGCTTGATTGACCTGAAGAGGGCAAATAATACTGAAATTATGCTCGCTAAGGTTAAGATGCCACTTCCTGATATGATGGCTGCAGTACTGGCTATGGATGAGTCAGTATTAGATGTTGATCAAGTGGATAACCTGATTAAGTTTTGTCCTTCCAAAGAGGAGATGGAACTTTTGAAGGGATACACAGGTGACAAGGAGAATTTGGGGAAGTGTGAACAGTTTTTTTTGGAGTTGATGAAGGTGCCACGGGTAGAATCAAAATTAAGAATATTCTCTTTCAAGATTCAGTTTGGGTCTCAGGTCACAGAATTTAAGAAGAGTTTAAACACTGTGAACTCTGCCTGTGAAGAGGTCCGAAATTCTGTCAAACTGAAGGAGATCATGAAGAAAATTCTTGTTTTAGGTAATACATTGAATCAAGGAACAGCAAGGGGTTCTGCAGTTGGATTCAAATTGGATAGTCTCTTAAAGCTCATTGATACTCGTGCTACTAACAATACGATGACACTAATGCATTATCTTTGCAAGGTCCTTGCTGAAAAGTCGCCTAGACTCCTTGATTTTCGCCTAGACCTTGTTAGCCTGGAACCTTCCACCAAGATACAATTGAAGTCATTAACAGAAGAGAGGCAGGCAATAATCAAGGGATTAGAAAAGGTTAAACAGGAGCTTGCTGCATCTGTAAATGATGGACCTGTGTCCGACGTTTTCCGTAAGACATTGAAAGGTTTCATAGATGTAGCTGAGTCCGAGTTGGCATCTCTAACAAATCTATTTTCTGTGGTGGGTAGAAATGCAGATGAACTTGCACTATACTTTGGCGAGGATCCTGCTCGCTGCCCGTTTGAGCAAGTTACGGTAACTCTCTTAAATTTTGTGAGGTTGTTTCGGAAAGCACATGAAGAGAATTGCAAACTAGCAGAGTCAGAGAAGAAGAAAGCTGAAAATGAGGCTAATATGGAGAAGGCCAAGGGTAAGACAAAGAAGAGTGCAAAAGATAGTTGA 4584 0.4426 MVLLTKLFYRKHPNHLLQISHKIYVFDCCFSNVVLDEDEYRAYMGGIVAQLQDHFPDVSFTVFNFKEGNKRSQISDILSQYDMTVVEYPRQYEGCPLLPLEVIHHFLRSSESRLSMEGQQNMLLMHCERGGWSMLAFMLAGLLLYRKQYTVEQKTLEMIYKQAPRELFHLLTPLNPQPSQLRYLRYISRRHLGSEWPPSDTPLYLDCMILKNLPSFDEGKGCRPVVRVYGPDPSKPANRRSSKLIFSTPKSKKHIHHYSQAECMLVKIDIRCHVQGDVVLECIHLNEDFNREVTMVRVMFHTAFVQSNILMLNRDDIDILWYAKDQFPKDFKAEVLFLDNDAVIHDLTTVDVSKDANETESVSSEKLYQVADIFSNVIDAREGKEEYDSLAFHDNAVGDGNYNEAWKEKVDHHALDEGNNKQVDKMDTGIKVKDIFVDDVKYRINESVDPNNDAVKDIAVDEGENKSNSTALASSKILETTEVTFDVHGELTLEQNKYDEDDKATEMEFDPKAAKQMSALSRLKSGKLRLSSTKKQLPSNSRPLGDTVSAKPKIKQQESQSFQVKQAKPNAVTRWVPSNKGSYTSSMHVYYPPSRINNAPAALPKCIASKEKMEDFKGRSLFAPAVSIDMTNYLKSRKVATSKSSGHIVPEADANCPPSSLLSIKETSLQSASKTQEVSSEKVLRPPPPPPPPPPSPARNSSFDAFEHLSLQDDASPLALASPLVSPSSSLGGKVSTAPQPPPTLISFTEQKVGANLQSKTSRPPPPSSFFGQNKGSGLPSPSSWKSVYSSIAIIEESRGSLPLSSSFSENLSKLSEVLTVTATPPPPPPPLPPPRYEVSSIPPSPTPTSAATPPKRGIPALHTFSTHRTSPPPSPPLPTASHKAPSAPPPPPPPPPPPPYSSTLPPPFPPFSKAPPPPPPPPPSPPYSTTPPPPCPPFSKAPSPPPPPPYRIAAPLAPPPPFSKAPLPPPPPPPPYSSAPPPSPFSKAPPPPPPPPYSSVLSPPPPPFSKAPPPPLPPPPLSGAPSPLPPPPLSRAPPPPPPPPPMSRAPPPPPPMSRAPPPPPSPGGRGPPPPRHPGGRGPPPPPGGAPPAKGANVGGDLKLRGRGGYSRSAGAGAMSPKRSLFKPLHWSKVTRALQGSLWEELQRHAEPYIAPEFDESELEKLFSANVAKPAHSKTTARRRSLESKTDKVRLIDLKRANNTEIMLAKVKMPLPDMMAAVLAMDESVLDVDQVDNLIKFCPSKEEMELLKGYTGDKENLGKCEQFFLELMKVPRVESKLRIFSFKIQFGSQVTEFKKSLNTVNSACEEVRNSVKLKEIMKKILVLGNTLNQGTARGSAVGFKLDSLLKLIDTRATNNTMTLMHYLCKVLAEKSPRLLDFRLDLVSLEPSTKIQLKSLTEERQAIIKGLEKVKQELAASVNDGPVSDVFRKTLKGFIDVAESELASLTNLFSVVGRNADELALYFGEDPARCPFEQVTVTLLNFVRLFRKAHEENCKLAESEKKKAENEANMEKAKGKTKKSAKDS* 1528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1047 1527 MobiDBLite consensus disorder prediction 683 699 - -
Lan1g1047 1527 Gene3D Protein tyrosine phosphatase superfamily 3 206 IPR029021 -
Lan1g1047 1527 MobiDBLite consensus disorder prediction 870 1092 - -
Lan1g1047 1527 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1116 1515 IPR015425 -
Lan1g1047 1527 MobiDBLite consensus disorder prediction 1499 1527 - -
Lan1g1047 1527 PANTHER FORMIN-J 1 1006 - -
Lan1g1047 1527 PANTHER FORMIN-J 1026 1523 - -
Lan1g1047 1527 MobiDBLite consensus disorder prediction 666 702 - -
Lan1g1047 1527 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 337 IPR035892 -
Lan1g1047 1527 Pfam C2 domain of PTEN tumour-suppressor protein 200 337 IPR014020 -
Lan1g1047 1527 SMART it6_source 624 1527 IPR015425 -
Lan1g1047 1527 MobiDBLite consensus disorder prediction 717 785 - -
Lan1g1047 1527 Gene3D - 207 337 - -
Lan1g1047 1527 Coils Coil 1490 1519 - -
Lan1g1047 1527 Coils Coil 1396 1416 - -
Lan1g1047 1527 MobiDBLite consensus disorder prediction 666 680 - -
Lan1g1047 1527 MobiDBLite consensus disorder prediction 819 1121 - -
Lan1g1047 1527 ProSiteProfiles C2 tensin-type domain profile. 200 340 IPR014020 -
Lan1g1047 1527 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1129 1508 - -
Lan1g1047 1527 MobiDBLite consensus disorder prediction 524 562 - -
Lan1g1047 1527 MobiDBLite consensus disorder prediction 822 853 - -
Lan1g1047 1527 Pfam Formin Homology 2 Domain 1121 1489 IPR015425 -
Lan1g1047 1527 SMART PTEN_C2_2 198 339 IPR014020 -
Lan1g1047 1527 Gene3D Formin, FH2 domain 1117 1500 IPR042201 -
Lan1g1047 1527 MobiDBLite consensus disorder prediction 525 562 - -
Lan1g1047 1527 MobiDBLite consensus disorder prediction 722 785 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1047 Lan-Chr1 20709155 20720957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1047 1 603 FH2 protein (formin) Gene Family AT5G07740 56.814 0.0 696
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1047 - - lang:109353635 1633.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1047 1 20709155 20720957 Lan1g1047 1 20709155 20720957 ECH
Lan12g1240 12 18376001 18386510 Lan1g1047 1 20709155 20720957 LSH