Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1041 ATGGAAAAGTTTTCAGGTATTTATAAGGAAGAGAATAAGATGGATTTGCCTCCTGGATTTCGGTTTCACCCTACTGATGAAGAGCTTATAAGTCAATACCTTTATAAGAAGGTTACTGATACAAAATTCATTGCAAGGGCTATTGGAGAAGTGGACCTGAATAAGTGTGAGCCATGGGATTTGCCATGGAAAGCTAAGATGGGAGAAAAGGAATGGTACTTTTTCTGTGTGAAGGATAGGAAATACCCAACTGGGTTGAGAACTAATAGAGCCACTGAACAAGGGTATTGGAAGGCTACAGGGAAAGATAAGGAGATTTTCAAAGGAAAATCATTGGTTGGGATGAAGAAAACTCTGGTTTTCTATAAAGGAAGAGCACCAAAAGGAGAGAAAAGTAACTGGGTCATGCATGAATATAGACTTGAGGGAAAATTTACTGCTAATTATCTCCTAGAAACTGCAAAGAATGAGTGGGTTATTTGTAGGGTTTTTGATAAGAGTTTAGTTGCCAAGAAAATTCATATTTCTGGGATAATGAAGTTGGACTCTTATGGAAATGAATTTGATTCTTATGTTCTATCACCAAAACCAATGAATGATTCTGTTTACGTGCCCTGCTTCTCCAATCCTATTGATAATGTTCAAAGAAACAACAACAACAACAACGAAGTTGGGATTTTTGATCCCTTCACCAACACCACTTATGGGGTTTTATCAAATCCATTACAATTTTCTTCTCTAAAAGTGCCACCATCTACAGTCACTGCCTCATTCTACACCTCTACCCAAGGTTTTCATCAAGTTCCAGCAAATTTACCATTACATGGTTCTGTTTACAACATGCAGGACCATACTATGATGAGAAACTTATATAACAACAACAACAACAACAATGGTTTCAAGAGTGATGGAGAAATGGTTAGTGTCTCACAGGAAACATGTCTCACCACTGATATGAATGCTGAAACCTCTTCTGTTCTGTCTAGTTTTGATATGTGTAGGTTACCCTTTCACAATCAGCACTATTCTCCTGCTCCTGCACCAATGGATCTTGATGGTTTATGGAATTACTAA 1074 0.3762 MEKFSGIYKEENKMDLPPGFRFHPTDEELISQYLYKKVTDTKFIARAIGEVDLNKCEPWDLPWKAKMGEKEWYFFCVKDRKYPTGLRTNRATEQGYWKATGKDKEIFKGKSLVGMKKTLVFYKGRAPKGEKSNWVMHEYRLEGKFTANYLLETAKNEWVICRVFDKSLVAKKIHISGIMKLDSYGNEFDSYVLSPKPMNDSVYVPCFSNPIDNVQRNNNNNNEVGIFDPFTNTTYGVLSNPLQFSSLKVPPSTVTASFYTSTQGFHQVPANLPLHGSVYNMQDHTMMRNLYNNNNNNNGFKSDGEMVSVSQETCLTTDMNAETSSVLSSFDMCRLPFHNQHYSPAPAPMDLDGLWNY* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1041 357 ProSiteProfiles NAC domain profile. 16 166 IPR003441 GO:0003677|GO:0006355
Lan1g1041 357 PANTHER NAC DOMAIN-CONTAINING PROTEIN 100 8 352 - -
Lan1g1041 357 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 352 - -
Lan1g1041 357 Gene3D NAC domain 25 169 IPR036093 GO:0003677|GO:0006355
Lan1g1041 357 SUPERFAMILY NAC domain 12 166 IPR036093 GO:0003677|GO:0006355
Lan1g1041 357 Pfam No apical meristem (NAM) protein 17 141 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1041 Lan-Chr1 20684076 20686286 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1041 14 357 NAC Transcription Factor Family AT5G07680 51.282 2.90e-112 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lan1g1041 NAM 2.9e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1041 - - gmx:100798002 468.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1041 1 20684076 20686286 Lan1g1041 1 20684076 20686286 ECH
Lan1g1041 1 20684076 20686286 Lan1g0100 1 756421 758184 LSH