Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1040 ATGGCAACCTTCACTACACAAGCTTTTGCCTCCATTTTGAGCCCATGTGTTTCTAAGCCAATGTTCCTCAATGCCTCTTCTACTAAACTTAACAGGAATGTGTCTGTTAGTTTTACACAAATGAGGTCTCATTCATATACCTCCTCCTTCAAGGTTCAAGCCAGGAAAGCAGAGTGGTTGCCAGGGTTGGACTCCCCAGATTACCTCACTGGCAGTCTTGCTGGTGACAATGGATTTGATCCTCTGGGTTTGGCTGAGGACCCAGAGAGCTTGAGATGGTTTGTTCAAGGTGAACTTGTGAATGGACGTTGGGCCATGTTAGGTGTTGCAGGAATGTTGCTTCCTCAAATCTTAACAAAACTTGGTCTTTTCAATATCCCTGAATGGTTTGATGCTGGAAAAGAACAATACTTTGCATCATCCTCAACACTATTGGTGATTGAGTTCCTTTTATTCAACTATGTGGAGATCAGAAGATTGCAGGATATCAAGAACCCTGGAAGTGTTAACCAAGACCCTATCTTTAAGCAATACAGTTTAGCCCCTAATGAGGTTGGATACCCTGGTGGGGTCTTTAACCCTTTGAATTTGGAGCCAACACTGGAGCTTAAAGAGAAGGAAATTGCCAATGGGAGAGTGGCAATGTTGGCATTCTTGGGATTAGTGACTCAGTACAACGTAACAGGGAAAGGACCATTTGAAAACCTCTTGCAGCATATCTCAGATCCATGGCACAACAGCATTGTCCAAAAACTGAGCGCTTACTAA 768 0.4349 MATFTTQAFASILSPCVSKPMFLNASSTKLNRNVSVSFTQMRSHSYTSSFKVQARKAEWLPGLDSPDYLTGSLAGDNGFDPLGLAEDPESLRWFVQGELVNGRWAMLGVAGMLLPQILTKLGLFNIPEWFDAGKEQYFASSSTLLVIEFLLFNYVEIRRLQDIKNPGSVNQDPIFKQYSLAPNEVGYPGGVFNPLNLEPTLELKEKEIANGRVAMLAFLGLVTQYNVTGKGPFENLLQHISDPWHNSIVQKLSAY* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1040 255 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 255 - -
Lan1g1040 255 SUPERFAMILY Chlorophyll a-b binding protein 55 251 - -
Lan1g1040 255 Gene3D Chlorophyll a/b binding protein domain 66 245 - -
Lan1g1040 255 Pfam Chlorophyll A-B binding protein 66 225 IPR022796 -
Lan1g1040 255 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 255 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1040 Lan-Chr1 20670968 20678280 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1040 42 253 Chloroplast and Mitochondria Gene Families AT3G61470 45.872 5.65e-68 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1040 K08910 - ath:AT3G47470 407.142