Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1039 ATGGCCACCTTCACTACACACGCTTCTGCCTCCATTTTGAGCCCATGTGTTTCTAAGCCAATGTTCCTCAATGCCTCTTCTACTAAACTTAACAGAGATGTGTCTGTTAGTTTTGCACAAAAGAAGACTACTCGTTCATACACCTCCTCCTCCAAGGTTCAAACCAGGGAAGCTGAGTGGTTGCCAGGTTTGGACTCCCCAGATTACCTCACTGGCAGTCTTCCCGGTGACAATGGATTTGATCCTTTGGGTTTGGCTGAGGAGCCACAAAGGTTGAATTGGTTTGTTCAAGGTGAGCTTGTGAATGGACGTTGGGCTATGTTAGGTGTTGCAGGAATGTTGCTTCCTCAAATCTTAACCAAACTTGGTCTTTTCAATATCCCTGAATGGTTTGATGCTGGAAAAGAACAATACTTCGCATCATCCTCAACACTATTGGTGATTGAGTTCCTTTTATTCAACTATGTGGAGATCAGAAGATGGCAAGATATCAAAAACCCTGGAAGTGTTAACCAAGACCCTATCTTTAAGCAATATAGCTTAGCCCCTAATGAGGTTGGGTACCCTGGTGGGGTATTTAACCCCTTGAATTTGGAACCAACATATGAGATTAAAGAGAAGGAAATTGCCAATGGGAGGCTTGCAATGTTGGCATTCTTGGGAAATGTGACTCAGCACAATGTAACAGGAAAGGGGCCATTTGAAAACTTCTCGGACTTTATCGCAGATCCATTGCACAACAACATTTTCCAAAACCTAAGTGGCCACTAA 771 0.4345 MATFTTHASASILSPCVSKPMFLNASSTKLNRDVSVSFAQKKTTRSYTSSSKVQTREAEWLPGLDSPDYLTGSLPGDNGFDPLGLAEEPQRLNWFVQGELVNGRWAMLGVAGMLLPQILTKLGLFNIPEWFDAGKEQYFASSSTLLVIEFLLFNYVEIRRWQDIKNPGSVNQDPIFKQYSLAPNEVGYPGGVFNPLNLEPTYEIKEKEIANGRLAMLAFLGNVTQHNVTGKGPFENFSDFIADPLHNNIFQNLSGH* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1039 256 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 255 - -
Lan1g1039 256 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 255 IPR001344 GO:0009765|GO:0016020
Lan1g1039 256 SUPERFAMILY Chlorophyll a-b binding protein 57 253 - -
Lan1g1039 256 Pfam Chlorophyll A-B binding protein 67 226 IPR022796 -
Lan1g1039 256 Gene3D Chlorophyll a/b binding protein domain 67 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1039 Lan-Chr1 20667218 20668445 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1039 60 254 Chloroplast and Mitochondria Gene Families AT3G61470 49.751 5.08e-68 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1039 K08910 - ath:AT3G47470 386.341