Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1034 ATGATGGAAGAAGATGATGATGATCTCCACCATCAACATCAACACCACACTCAAAACTTCCCATTCCAACTCCTTCACAAAAAGGAAGATCAAGAACCACCATCATGCTCAACCGTATCCACATATCCAACCCTAGCAATCTCACCAACAGAACCAACTACTTCAAATTCCTCTAAGAAGCCACCGCCAAAGCGAGCCTCCACCAAAGACCGCCACACAAAGGTTGACGGCCGTGGCCGCCGTATCCGAATGCCGGCTCTGTGTGCCGCCAGAGTTTTCCAGCTTACACGCGAGCTCGGGCACAAGTCTGATGGCGAAACTATTGAGTGGCTCCTCCAGCAGGCGGAACCCTCCGTCATCGCCGCCACCGGAACGGGCACCATCCCTGCGAATTTTACATCCCTGAACATCTCTCTTAGAAGCTCTGGGTCCACCATGTCGGTGCCATCTCAACTTAGACCCTCGTATTTCAACCCTAACTTCTCACTTCCACAACAACGTAGGACTTTGTTCCCTGGAATAGGGTTTTCTTCTGAGAACAACAACACATCAACGCTTCTGAATTTTCAACATTCCAATAACCTAACCACGTTGCAAGCGAAGCAGGAACTTCGTGAAGGTGTTGGCGGTGGTCAATCTTCTTCAACCACGTTGGATTTATCTGATGCAAACACGGTTGAAGGGTTAGAAACAAAAACGAGACCAACGGAGCAAGACCATTCGTCAACACAACATCAAATAGGTAGTTATCTGCTACAGTCAAGTGCAGGTGCTATTCCGGCGAGTCAAGCTCAGATTCCGGCAAATATATGGATGGTGGCGCAGGCTACCACCTCCGCGAATTCAAATAACCAGGTTATGAGTCACGGTGACCCTATATGGACATTTCCACAAGTAAATAATAGTGCTGCTTTATATAGAGGCACTGCTTCTACTGGGTTGCATTTTATGAACTATCCTACGCCCATGGCTTTGTTACAGGGTCAGCAACAATTTGCTTCATCTATGAATGAAGGGCATTTGAGTATGCTTGCAGGACTTAGCCCTTATCGGCCGGTGATCGGTGTTTCTGAGTCTCAGGCAAGTGATGATCGCCATGATTCCAATACTCACCACTCGTAA 1122 0.4795 MMEEDDDDLHHQHQHHTQNFPFQLLHKKEDQEPPSCSTVSTYPTLAISPTEPTTSNSSKKPPPKRASTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPSVIAATGTGTIPANFTSLNISLRSSGSTMSVPSQLRPSYFNPNFSLPQQRRTLFPGIGFSSENNNTSTLLNFQHSNNLTTLQAKQELREGVGGGQSSSTTLDLSDANTVEGLETKTRPTEQDHSSTQHQIGSYLLQSSAGAIPASQAQIPANIWMVAQATTSANSNNQVMSHGDPIWTFPQVNNSAALYRGTASTGLHFMNYPTPMALLQGQQQFASSMNEGHLSMLAGLSPYRPVIGVSESQASDDRHDSNTHHS* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1034 373 MobiDBLite consensus disorder prediction 1 15 - -
Lan1g1034 373 MobiDBLite consensus disorder prediction 1 79 - -
Lan1g1034 373 MobiDBLite consensus disorder prediction 34 62 - -
Lan1g1034 373 ProSiteProfiles TCP domain profile. 68 122 IPR017887 -
Lan1g1034 373 PANTHER TRANSCRIPTION FACTOR TCP14-LIKE 9 372 - -
Lan1g1034 373 MobiDBLite consensus disorder prediction 208 224 - -
Lan1g1034 373 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 9 372 IPR005333 GO:0003700
Lan1g1034 373 Pfam TCP family transcription factor 67 240 IPR017887 -
Lan1g1034 373 MobiDBLite consensus disorder prediction 205 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1034 Lan-Chr1 20636638 20638290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1034 57 337 TCP Transcription Factor Family AT3G47620 44.478 1.20e-67 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lan1g1034 TCP 1.4e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1034 - - pvu:PHAVU_003G190900g 483.796
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1034 1 20636638 20638290 Lan1g1034 1 20636638 20638290 ECH
Lan12g1255 12 18480616 18482324 Lan1g1034 1 20636638 20638290 LSH
Lan1g1034 1 20636638 20638290 Lan1g0087 1 674200 676474 LSH