Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1029 ATGGGGAAGTCGCCAGGAAAATGGATCAAAACTTTACTGTTCAGAAAAAGGTCATCCAAATCAAATATTTCACAAGGAAGAGAGAAGCTTGTTAGTCAAAAGGAAGGAGCGGTTCCTTTGAAGTTGTCAGAAACTGACTTGGCTGCAGATCCAACCTTGAATTCTAATGGTAGAAATGAGGAAGACATATATCTGGAGGATAAAGAAGCAGAAAATGTTTCACCTGGAGATCTAGAAGTAAACATGGTACAGTCTGTTCAACAAGATGCTCCATTTGATCAAGAGAATATAATACTGGTGGAAGCAGCAACAAAAACACAGGCTGCTTTCAGGGGTTACTTGGCTCGGAGGGCATTCAGGGCCCTAAAAGGCATAATAAGGTTGCAAGCACTTATTCGTGGGCACTTGGTTAGGAGACAAACTGTTGTTACATTATGCTCTATGTATGCGATTGTCAAGTTACAAGCTCTTGTTCGTGGAAGAAGAGTTAGACAGTGTAATCTATTGAAACCTCTGGATGGCAAACAAGTCAAGCCAAATGATGTGCATACCAGAATTATGAAGCTCTCTGCAAATGCTTTCATCCGTAAGCTTCTTGCATCATCTATTGTAATATTGCCCCTGCGTTTGCAATATGTTGCTGGCGATCCAAATTCAGTCCTGAGTTGGTTGGAGCGCTGGTCAGCATCTTACTTTTGGAAACCAGTTACACAACCCAAGAAAGTTCTAGACATTAAGTCTCAGAGAAAGCAAGGTAATAATTCAATTGGAGAAGCTCAAATGAGTAAGTCAAAACGTACCAACCGGAAGCTTCCTACTTCTAATTTTGACTCGGTTCCGGTGCAAGCAAATCCTGAACTTGAGAAACCAAAACGAAACGCAAGGAGAATTTCAAGCCAGCCCTCAGATCCTGTGCAGGAAAGTCCACAAGTTGAGTTGGAAAAGATTAAGCGAAACTTGAGAAAGGTTCACAACCCAGTTGTTGAGAATAATGCCCCATCAGAAGTTGAATCTGAGACCCCAAAGCAGCATTCCGAAAGGGCAGCAACAGTCAAATCAGGCCATGCTGGTGTTTTAGAACAAGGGGTCAATGGTTCTAATGAGAAGATTAAGAAAGAAGGGACATTAATCATTTCCAGTGTGCCTCATAGAGAAATTCCTCCTGCACCTTTTGTTAGTAAGGACGTGTCTGACATTCCAAGTATTAATCAAGAGGTTGTTGAATCAAATCCCCTGACCGATATTACAAGTAAAGATGAAAACATTTCTGATAATGATGTAAAGAATGAGCCCAAAGATTTACTAGAGACTGTTTGTAAAGATGAAAATTCTCATTTAACTAATGGAGATCTTAGTCACAAGGAAGATCCAACTGGCAGTGAAAACTTGAAACCAACCCGAAAATCCCCAATTGTAACAAAGCAGGATCGTGCAGAGAATGGTTCACTGAATAGTCCAACATTACCTAGTTATATGGCAGCAACTGAATCTGCTAAGGCAAAGTTGAGGGCACAAGGATCCCCAAGACTTGCACAAGAGGTGAGTGAAAGAAACAACCCTGCACGGCGACATTCTCTGCCGTCTTCAATTAACAGCAAAATTAGTTCACATTCACCTAGGACACAGAGACCAGCTCAAGCAGGTAGCAAAGGGGACCATAAAAGTGACAAAACTGTATCATCTTCTAGAGAAGGCAATGTTCATCTTGCAGGAAAGGTAGTTCAAGCAGAATGGAAGAGGTAA 1743 0.4142 MGKSPGKWIKTLLFRKRSSKSNISQGREKLVSQKEGAVPLKLSETDLAADPTLNSNGRNEEDIYLEDKEAENVSPGDLEVNMVQSVQQDAPFDQENIILVEAATKTQAAFRGYLARRAFRALKGIIRLQALIRGHLVRRQTVVTLCSMYAIVKLQALVRGRRVRQCNLLKPLDGKQVKPNDVHTRIMKLSANAFIRKLLASSIVILPLRLQYVAGDPNSVLSWLERWSASYFWKPVTQPKKVLDIKSQRKQGNNSIGEAQMSKSKRTNRKLPTSNFDSVPVQANPELEKPKRNARRISSQPSDPVQESPQVELEKIKRNLRKVHNPVVENNAPSEVESETPKQHSERAATVKSGHAGVLEQGVNGSNEKIKKEGTLIISSVPHREIPPAPFVSKDVSDIPSINQEVVESNPLTDITSKDENISDNDVKNEPKDLLETVCKDENSHLTNGDLSHKEDPTGSENLKPTRKSPIVTKQDRAENGSLNSPTLPSYMAATESAKAKLRAQGSPRLAQEVSERNNPARRHSLPSSINSKISSHSPRTQRPAQAGSKGDHKSDKTVSSSREGNVHLAGKVVQAEWKR* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1029 580 MobiDBLite consensus disorder prediction 310 324 - -
Lan1g1029 580 MobiDBLite consensus disorder prediction 446 462 - -
Lan1g1029 580 MobiDBLite consensus disorder prediction 410 431 - -
Lan1g1029 580 MobiDBLite consensus disorder prediction 547 561 - -
Lan1g1029 580 PANTHER PROTEIN IQ-DOMAIN 31 1 562 - -
Lan1g1029 580 Gene3D - 97 147 - -
Lan1g1029 580 MobiDBLite consensus disorder prediction 463 492 - -
Lan1g1029 580 ProSiteProfiles IQ motif profile. 99 127 IPR000048 GO:0005515
Lan1g1029 580 MobiDBLite consensus disorder prediction 444 580 - -
Lan1g1029 580 PANTHER IQ-DOMAIN 5-RELATED 1 562 - -
Lan1g1029 580 ProSiteProfiles IQ motif profile. 123 150 IPR000048 GO:0005515
Lan1g1029 580 Pfam Protein of unknown function (DUF4005) 469 555 IPR025064 -
Lan1g1029 580 MobiDBLite consensus disorder prediction 244 347 - -
Lan1g1029 580 MobiDBLite consensus disorder prediction 521 545 - -
Lan1g1029 580 Pfam IQ calmodulin-binding motif 101 120 IPR000048 GO:0005515
Lan1g1029 580 Pfam IQ calmodulin-binding motif 123 140 IPR000048 GO:0005515
Lan1g1029 580 MobiDBLite consensus disorder prediction 248 281 - -
Lan1g1029 580 SMART iq_5 98 120 IPR000048 GO:0005515
Lan1g1029 580 SMART iq_5 121 142 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1029 Lan-Chr1 20608869 20613837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1029 1 580 IQD Protein Family AT1G74690 43.910 6.98e-119 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1029 - - gmx:100794636 764.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1029 1 20608869 20613837 Lan1g1029 1 20608869 20613837 ECH
Lan12g1261 12 18507804 18514086 Lan1g1029 1 20608869 20613837 LSH