Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1021 ATGGAAATGGGTACTGTTGCATGCGTTATCTTTCTGATTTTCACTACAGTTTTCTGCTCTGATTCCTGTTTTGCTCTCACCCAAGATGGTGTGACATTGTTGGAAATCAAAAGCACTTTGAATGACACTAAGAATGTTCTCAGCAACTGGCAAGAGTTGGATGAATCTCCATGTACATGGACTGGTATCACTTGTCATCCTGGCGAACAACGAGTTCGCGAAATAAATTTGCCATATATGCAGCTTGGAGGAATTATCTCTCCAAGTATTGGCAATCTCAGTAGACTTCAGAGACTGGCACTTCATCAGAATGGCTTGCATGGAATTATTCCCAATGAAATCACCAATTGTTCTGAGCTAAGAGCGCTGTATTTGAGGGCTAATTATTTCCAAGGAGGTATACCATCTAATATTGGAAAACTTCCATTTTTAAATATACTGGATTTATCAAGCAACTTATTAAAAGGTGCTATACCTTCCACTATTGGTGGTCTATCACATTTGCAAGTTCTGAACTTGTCTACCAACTTTTTCTCTGGTGAAATTCCTGACATTGGAGTACTTAGCACCTTCGGGAACAACTCGTTTATTGGCAATTCAGGTCTTTGCGGGCGGCAAGTTCAAAAGCCCTGTCGGACATCACTTGGTTTCCCTGTGGTGCTACCACATGCCGAAAGTGATGAAGCTGTAGTCCCTACCAAAAGATCTTCACATTACATGAAGGGGGTGATAATTGGTGCAATGTTATTGATGGGTCTTGCACTTGTCGTAATCCTTTCATTCCTCTGGATTCGTTTGTTGTCGAAGAAGGAAAGAGCTGTCAGGAAATACACAGAAGTCAAAAAACAAGTCGATCCAGAAGCAAGTAAGAAGGGTGCTAAACTTATTACCTTCCATGGTGATATGCCATACACATCATCTGAGATCATAGAGAAGTTGGAGTCTCTTGATGAAGAGGATATAGTAGGATCAGGAGGGTTTGGTACTGTTTACCGAATGGTGATGAATGATTGCGGTACCTTTGCTGTTAAGCGGATTGACAGAAGTCGTAAAGGGTGTGATCAAGTATTTGAAAGGGAGCTAGAGATCTTGGGAAGCATTAACCACATAAATTTGGTTAACCTGCGTGGTTATTGCAGGCTCCCGACTTCAAGGCTCCTCATCTATGATTATTTGGCCATGGGAAGCTTAGATGATCTCTTGCATGAAAATACTGAACAAGTACTGAATTGGAGTGATCGCTTAAAGATAGCCCTCGGTTCTTCTCGGGGTTTGGCATATTTGCACCATGAGTGCTGTCCCATAATTGTGCACCGGGACATAAAATCTAGCAATATTCTCCTTGATGAAAACATGGAGTCTCATATTTCTGATTTTGGTCTTGCAAAGCTTTTGGTTGATGAAGATGCCCATGTTACCACAGTAGTTGCTGGCACATTTGGCTATTTGGCACCAGAGTATCTGCAAAGTGGAAGAGCCACTGAGAAGTCCGATGTATATAGCTTCGGAGTCCTACTGCTAGAACTTATAACCGGAAAGAGGCCTACAGATCCTTCCTTTGTGAAGAGAGGTTTAAATGTTGTTGGTTGGATGAACACATTAGTGAAAGAAAACAGATTGGAAGAAGTGGTAGACAAAAGGTGCAAAGATTTAGATGCTGGAAGTCTAGAAGTAATACTAGAGGTAGCAGCAAGATGCACCGATGCAAATGCCGATGATCGTCCAACAATGAATCAGGTCTTACAAATCCTTGAACAAGAGGTCATGTCTCCTTGCCCTAGTGAATTTTATGAGTCACATTCAGATCACTCTTAA 1815 0.416 MEMGTVACVIFLIFTTVFCSDSCFALTQDGVTLLEIKSTLNDTKNVLSNWQELDESPCTWTGITCHPGEQRVREINLPYMQLGGIISPSIGNLSRLQRLALHQNGLHGIIPNEITNCSELRALYLRANYFQGGIPSNIGKLPFLNILDLSSNLLKGAIPSTIGGLSHLQVLNLSTNFFSGEIPDIGVLSTFGNNSFIGNSGLCGRQVQKPCRTSLGFPVVLPHAESDEAVVPTKRSSHYMKGVIIGAMLLMGLALVVILSFLWIRLLSKKERAVRKYTEVKKQVDPEASKKGAKLITFHGDMPYTSSEIIEKLESLDEEDIVGSGGFGTVYRMVMNDCGTFAVKRIDRSRKGCDQVFERELEILGSINHINLVNLRGYCRLPTSRLLIYDYLAMGSLDDLLHENTEQVLNWSDRLKIALGSSRGLAYLHHECCPIIVHRDIKSSNILLDENMESHISDFGLAKLLVDEDAHVTTVVAGTFGYLAPEYLQSGRATEKSDVYSFGVLLLELITGKRPTDPSFVKRGLNVVGWMNTLVKENRLEEVVDKRCKDLDAGSLEVILEVAARCTDANADDRPTMNQVLQILEQEVMSPCPSEFYESHSDHS* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1021 604 Gene3D Phosphorylase Kinase; domain 1 276 391 - -
Lan1g1021 604 ProSiteProfiles Protein kinase domain profile. 316 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1021 604 Gene3D Transferase(Phosphotransferase) domain 1 392 594 - -
Lan1g1021 604 Gene3D Ribonuclease Inhibitor 27 213 IPR032675 -
Lan1g1021 604 ProSitePatterns Serine/Threonine protein kinases active-site signature. 436 448 IPR008271 GO:0004672|GO:0006468
Lan1g1021 604 SUPERFAMILY L domain-like 23 188 - -
Lan1g1021 604 SMART serkin_6 316 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1021 604 ProSitePatterns Protein kinases ATP-binding region signature. 322 344 IPR017441 GO:0005524
Lan1g1021 604 PANTHER LRR RECEPTOR-LIKE KINASE 2 603 - -
Lan1g1021 604 PANTHER RECEPTOR-LIKE PROTEIN 55 2 603 - -
Lan1g1021 604 Pfam Protein kinase domain 318 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g1021 604 SUPERFAMILY Protein kinase-like (PK-like) 298 585 IPR011009 -
Lan1g1021 604 Pfam Leucine rich repeat N-terminal domain 28 65 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1021 Lan-Chr1 20568464 20572994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1021 25 593 Receptor kinase-like Gene Family AT2G35620 49.561 0.0 549
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Lan1g1021 Pkinase 1.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1021 - - gmx:100803920 1039.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1021 1 20568464 20572994 Lan1g1021 1 20568464 20572994 ECH
Lan1g1021 1 20568464 20572994 Lan1g0075 1 602468 606461 LSH