Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1016 ATGGAGGAAAAGTTGAAGCAGAGAGAGTTCGATTTGGCATCCGTCGCGGACCTTTGTTCAGGTTCTTCTTCGGCTTCGCCGGGGATAGCTCGCTTCACCGTCGATGGACTTCAAATTCTTCAGGAATCGAATCGGATTCTCGTCAATGTTCATATCCGAACTGTTCAGGTATTCGAGTTAGGGTCTGTTCAATCGGTTTGCATGGTGGAAGAAGAAGGCTCTGATGTTGGTAAAAAGACATCATATTCCAGGGGAGTCACCATGCAGTTTAGAAATGAGGAGGACAGTGCAGCCTTCCATAGTGTAGTCAAACAATGGAAGAAAGAAGGCAAAGTTCAAGGAGCAAACATACCAAATGGAACTATTGTAACTTCTAAAAGTAAATTTGATGAGAAGATAGAGTCATCATCTGCAAAAATGTATTTTCATTATTACGGACAACTTCTGCACCAGCAAAATATGTTGCAAGACTATGTGAGGACAGGAACCTATTATGCTGCTGTTATTGAGAACCGTGCCGATTTCATAGGTCGGGTAGTAGTTGATGTTGGTGCTGGCAGTGGTATTTTGTCATTATTTGCTGCTCAGGCTGGTGCAAAACATGTTTATGCTGTGGAAGCATCTGAAATGGCAGAATATGCACAAAAACTTATTGCTGGGAATCCAACACTTGCTCAACGAATTACAGTGATTAAAGGCAAAGTTGAGGATGTTGAATTGCCAGAAAAAGCAGATGTTCTTATCTCTGAGCCCATGGGCACCTTGCTAGTTAATGAAAGAATGCTGGAGTCTTATGTCATTGCCAGAGATAGGTTTCTCACCCCTAGTGGGAAAATGTTCCCTGCAGTGGGAAGGATTCACATGGCACCTTTCACTGATGAGTATTTATTTACTGAAATAGCTAATAAGGCCCTGTTTTGGCAGCAGCAAAACTATTATGGTGTTGATTTGACGCCCTTACATGGGACTGCATTTCAAGGGTACTTTTCTCAGCCTGTGGTGGATGCTTTTGATCCAAGATTGTTAGTTGCTCCTCCAATGTTCCATGTGATAGACTTCACCAAAATCCAGGAAGAGGACCTGTATGAAATTGACATTCCTCTGAAATTCATAGCCTCTGTGGGTGCCCGAGTGCATGGGTTGGCATGTTGGTTTGATGTACTATTCAATGGAAGTACTGTGCCAAGGTGGCTTACCACTGCTCCTGGTTCACCAACAACCCATTGGTACCAGTTACGCTGTGTTCTCTCTCAGCCAATTTATGTCATGGCAGGACAAGAAATTACTGGCAGACTTCACTTGATTGCCCACAATGCACAGAGTTATACTATATATTTAACATTGTCAGCTAAAATGTGGGGTCCTGGTGCTGAACAAGGTGGGATTCTTCAAACATCATCCTGTAAGCTTGATCTAAAAGAACCTTACTATAGAATTTCTCAACCGCAAGCTTATGCATTAGCCCAAGATCAGCAGCAACCACATTCACTTCTACAGACACAGGATTTACACATCCAATCTCAGGATTTGGATTCCGAAATAATGCAACAGCTTTCACCTAATTCACGTGCTCACCTTGATTCATTGATGCAGAATATTTAA 1602 0.4251 MEEKLKQREFDLASVADLCSGSSSASPGIARFTVDGLQILQESNRILVNVHIRTVQVFELGSVQSVCMVEEEGSDVGKKTSYSRGVTMQFRNEEDSAAFHSVVKQWKKEGKVQGANIPNGTIVTSKSKFDEKIESSSAKMYFHYYGQLLHQQNMLQDYVRTGTYYAAVIENRADFIGRVVVDVGAGSGILSLFAAQAGAKHVYAVEASEMAEYAQKLIAGNPTLAQRITVIKGKVEDVELPEKADVLISEPMGTLLVNERMLESYVIARDRFLTPSGKMFPAVGRIHMAPFTDEYLFTEIANKALFWQQQNYYGVDLTPLHGTAFQGYFSQPVVDAFDPRLLVAPPMFHVIDFTKIQEEDLYEIDIPLKFIASVGARVHGLACWFDVLFNGSTVPRWLTTAPGSPTTHWYQLRCVLSQPIYVMAGQEITGRLHLIAHNAQSYTIYLTLSAKMWGPGAEQGGILQTSSCKLDLKEPYYRISQPQAYALAQDQQQPHSLLQTQDLHIQSQDLDSEIMQQLSPNSRAHLDSLMQNI* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1016 533 PANTHER HISTONE-ARGININE METHYLTRANSFERASE 1.4-RELATED 3 489 - -
Lan1g1016 533 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 134 449 IPR025799 GO:0016274|GO:0018216
Lan1g1016 533 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 3 489 IPR025799 GO:0016274|GO:0018216
Lan1g1016 533 Gene3D - 283 491 - -
Lan1g1016 533 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 144 455 IPR029063 -
Lan1g1016 533 CDD AdoMet_MTases 180 257 - -
Lan1g1016 533 Pfam Ribosomal protein L11 methyltransferase (PrmA) 177 250 - -
Lan1g1016 533 Gene3D Vaccinia Virus protein VP39 121 281 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1016 Lan-Chr1 20535546 20542645 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1016 141 431 C2H2 Transcription Factor Family AT3G12270 33.333 9.68e-38 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1016 K05931 - gmx:100780736 914.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1016 1 20535546 20542645 Lan1g0062 1 327755 334113 LSH
Lan1g1016 1 20535546 20542645 Lan4g0079 4 1029506 1036842 PCT
Lan4g0079 4 1029506 1036842 Lan1g1016 1 20535546 20542645 PCT