Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1001 ATGACATCAATTCCAATACCTTCACCTTCTTCCTCTTCTTCTTCGAAGGGTAATAGCAATACCAGAAAACGTGAACGTGAAAGATGCTTGAAGATGACCCACATGTACAATCACCTTCAAGCCACTGTCCCTGGTCTCTTCCCCAAGGCTTCAAGGGAAATGATTGTAAACAAAACAATTGAATACATTAAGGAGCTTGAGGAGAAAAAGCAAAAGCTGGAAGAACTCAAGGACTCAATGCTTCAATCTACTACAACTAGCACCAATTGCTCTCTCAAACTTTCTATCTCTACCAATAATGTTGCCTTCTTTGGTATTCAATCACTGCATCAACCTGGTTCCATCACACTCATTTTCAAGGTCTTCTTCAAACACCAGGCTCAAATCTTGTCTGCAAATGTTTCTGTTAATCAAGGGATTTTGATATTGGCAATCACAGCTTTGGTACAAAATGGTACCCTTGAAATTATTAAGAGAGAAATTATGAGTTTTTAG 495 0.3859 MTSIPIPSPSSSSSSKGNSNTRKRERERCLKMTHMYNHLQATVPGLFPKASREMIVNKTIEYIKELEEKKQKLEELKDSMLQSTTTSTNCSLKLSISTNNVAFFGIQSLHQPGSITLIFKVFFKHQAQILSANVSVNQGILILAITALVQNGTLEIIKREIMSF* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1001 164 Pfam Helix-loop-helix DNA-binding domain 22 67 IPR011598 GO:0046983
Lan1g1001 164 MobiDBLite consensus disorder prediction 1 25 - -
Lan1g1001 164 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 20 84 IPR036638 GO:0046983
Lan1g1001 164 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 16 66 IPR011598 GO:0046983
Lan1g1001 164 Gene3D - 9 98 IPR036638 GO:0046983
Lan1g1001 164 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 16 163 - -
Lan1g1001 164 Coils Coil 56 86 - -
Lan1g1001 164 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 16 163 - -
Lan1g1001 164 MobiDBLite consensus disorder prediction 1 18 - -
Lan1g1001 164 SMART finulus 22 72 IPR011598 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1001 25 87 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G49770 44.444 6.18e-08 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lan1g1001 HLH 2.5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1001 - - lang:109353111 273.863