Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0985 ATGAATATTAGTATAACATTATCATCAGCAGTGTGCAAGCCCATAGTGAATTTCCAACCGGCACTCACCTCTTTGTTGAATCAGCATCACCAACAACAACAACAACGTAAGGACAAGGTGGTAGTTATCATGGGAGCCACCGGTTCCGGCAAGTCTAAGTTGGCCATAGACTTAGCCACCCATTTCCCACCGGCAGAGATAATTAACTCTGATAAAATGCAAGTTTATAAAGGTCTTGATATCACTACTAACAAGGTTACTGAGGAAGAGTGTCGTGGGGTCACACACCATCTCTTAAGCATTGTTGATGATCCTAACTACAATTTCACTGCCAATGATTTTTGCCACCATGCCTCTCTCGCCATTGATTCCATTGTAGGTAGAGATGGCTTGCCCATCATTGCTGGTGGCTCCAACTCCTTCATTGAAGCTTTGGTGAATCATGATTCTACATTCCGAGCAAGGTATGAGTGTTGTTTCCTATGGGTTGATGTATCACTCCCAATTCTTCACTCATCGCTCTCATCAAGAGTTGATCGAATGATAGAAGCTGGACAACTCGATGAAGTTCGTCAATTTTTCGATCATTCTATTAGTGATTACACAAGAGGAGTTCGAAGGGCAATAGGGGTACCTGAATTTGATGAATTTTTAAGAGAAGAAGGTTCAACATATGGTGATCAAAGTAAAAAGAAGAAGCTTCTGGAAGCTGCCATTGCTATGACAAAAGTGAATAATTGCAAGCTCGCGAGTCGCCAAGTGCAAAAGATCAATCGCCTTTACACAATTTGGAAAAAGAACACGTATAGGCTAAATGCTACTGAATCTGTATTCAACAAAAGCGCATGGGATGATGACGTGGCGGCCAAGGGTCGTAGGATTTTGCAAAAGTTCCTGTACGATGATGCTTGTGTTTTAGTTCCTGCCGGTGCGCCACTGTCACCATCGCTTCCGCCAGCTATGGCGGCGATAACTCATTAG 981 0.4312 MNISITLSSAVCKPIVNFQPALTSLLNQHHQQQQQRKDKVVVIMGATGSGKSKLAIDLATHFPPAEIINSDKMQVYKGLDITTNKVTEEECRGVTHHLLSIVDDPNYNFTANDFCHHASLAIDSIVGRDGLPIIAGGSNSFIEALVNHDSTFRARYECCFLWVDVSLPILHSSLSSRVDRMIEAGQLDEVRQFFDHSISDYTRGVRRAIGVPEFDEFLREEGSTYGDQSKKKKLLEAAIAMTKVNNCKLASRQVQKINRLYTIWKKNTYRLNATESVFNKSAWDDDVAAKGRRILQKFLYDDACVLVPAGAPLSPSLPPAMAAITH* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0985 326 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 41 152 IPR027417 -
Lan1g0985 326 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 167 268 - -
Lan1g0985 326 ProSiteProfiles Guanylate kinase-like domain profile. 38 127 IPR008144 -
Lan1g0985 326 Gene3D - 37 299 IPR027417 -
Lan1g0985 326 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 29 303 IPR039657 -
Lan1g0985 326 Pfam IPP transferase 74 148 - -
Lan1g0985 326 Pfam IPP transferase 153 255 - -
Lan1g0985 326 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC 29 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0985 Lan-Chr1 20355300 20356602 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0985 154 299 C2H2 Transcription Factor Family AT2G27760 30.058 8.21e-16 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0985 K10760 - gmx:100778430 391.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1310 12 18794173 18795500 Lan1g0985 1 20355300 20356602 LSH