Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0983 ATGAAAATGATAATCGCTTATTATACATCCACTTTCTACTTTTCTACTATTTTTATTTTCTGGATTTGGCAATTTATTCCCCGCTTCCTTGAAGAAAGAGTAAGGAGAATGGCCACTTCATCAGCTATTGAGAATTTTGATGAATCTATGAAGAAACAGATAGCATCGCTTTTGCGGGTTATGAATTTAGTTAAATACTGCAAACAAGATAGTACTCCTTGCAAAATTGACGAGGGTCTGTTTTTGGGTTCACTTGGTGCTTCAAATAACAAGGATGCATTGAAAGGCTTGAATGTTACTCACATTTTGACTGTGGCTGGTACATTGGCACCTGCACATCCTGGAGATTTTGTCTATAAAATTATACAGGTTGCCGACAGAGACGATGTCAACATAAAACAGTACTTCGATGAGTGTTTTGATTTTATAGATGAAGCCAAAAGACGTGGTGAAGGTGTTTTAGTTCATTGTTATGCTGGAAAATCAAGGAGTGTGACTATTGTTGTCGCATATCTGATGAAGACTCGCGGAATGAGCTTATCTGAAGCTCTGCAACAAGTAAAGGGCAAACGACCAGTAGCAGCTCCAAATCCTGGTTTCGTTCAGCAGCTGCAGGACTTCGAAAAATCTCTTCAAGTTAAAAATTGA 648 0.3827 MKMIIAYYTSTFYFSTIFIFWIWQFIPRFLEERVRRMATSSAIENFDESMKKQIASLLRVMNLVKYCKQDSTPCKIDEGLFLGSLGASNNKDALKGLNVTHILTVAGTLAPAHPGDFVYKIIQVADRDDVNIKQYFDECFDFIDEAKRRGEGVLVHCYAGKSRSVTIVVAYLMKTRGMSLSEALQQVKGKRPVAAPNPGFVQQLQDFEKSLQVKN* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0983 215 Pfam Dual specificity phosphatase, catalytic domain 80 209 IPR000340 GO:0008138|GO:0016311
Lan1g0983 215 SMART dsp_5 72 210 IPR020422 GO:0006470|GO:0008138
Lan1g0983 215 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 71 213 IPR029021 -
Lan1g0983 215 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 133 192 IPR000387 GO:0016311|GO:0016791
Lan1g0983 215 Gene3D Protein tyrosine phosphatase superfamily 74 215 IPR029021 -
Lan1g0983 215 CDD DSP 73 206 - -
Lan1g0983 215 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 14 214 - -
Lan1g0983 215 PANTHER BNAA01G23680D PROTEIN 14 214 - -
Lan1g0983 215 ProSiteProfiles Dual specificity protein phosphatase domain profile. 72 213 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0983 Lan-Chr1 20334306 20337148 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0983 75 212 Protein tyrosine phosphatase (PTP) family AT3G06110 59.420 1.12e-58 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0983 - - lang:109352945 414.461