Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0948 ATGAAAGTAATGACCTTTTCTGTTGGCATAACAAAACCCAACTTGTTGTTTGGGTTACCATTTAGCTGTGTGAGGAGGATCACAGGGTTTCACTATTCTGTTGCTAATAAGACATTCACTTGTTCTTCAATTGCTCAACCCACTGCCAATTTCGACTCCGGTCGAGTTCGCAGGAGAAAGGGAGGCTCCTCATCATTATATATTCATCCTAGTTTACCTGAAATGAGGAAAGATATGTTGGCCACGCGTAAAAAGGTTTACGAGTTCTTGATCAGTGTTGGCATTGTTCCAGATGAGCTTGATGGCCTTGAACTTCCAGTCACAATTGAGGTTATGACAGAACGCGTCGAATTTCTTCACAATTTGGGCCTTACAGTTGAAGACATTAACAATTATCCACTTGTCCTTGGCTGCAGTGTCAAGAAGAATATGGTTCCCGTGCTCGATTACCTTGGTAAACTAGGAGTCAGGAAATCTACATTCACACAGTTCTTGCGCAGATACCCGCAAGTGCTCCACGCTAGTGTGGTTGTGGATCTTGTGCCGGTGGTCAAGTATCTTCAAGGGATGGATATAAGGCCTGAAGATATTCCTCGTGTTCTTGAGCGGTACCCTGAAGTTTTAGGATTCAAACTCGAGGGAACCATGAGCACATCGGTTGCTTATTTGGTTGGAGTTGGGGTAGCAAGGAGGGAAATCGGAGGGGTCTTAACTAGGTACCCTGAAATTTTGGGGATGAGAGTTGGTAGAATCATCAAGCCTTTTGTAGAGTTTCTACAGAACTTGGGAATTCCAAGGTTAGCCATTGCTAGACTGATAGAGCAACGGCCTTATATTCTTGGATTTGGGCTGGACGAGAAGGTGAAGCCAAATGTCGAATCCCTTGAAGAGTTTAATGTTAGGAGAACATCACTTCCCTCTATAATCGCGCAGTATCCTGACATCATTGGAATTGACTTAAAGCCAAAGCTTGTCAATCAAAGAAGTTTACTCAATTCTGTACTCGATTTGGATCCTGAGGATTTTGGCAGAATCGTTGAGAAGATGCCACAGGTTGTTAGTCTCAGTAGTGAACCTATGCTGAAGCACGTTGATTTTCTTAAGGAATGTGAATTTTCCTTGCAGCAAATGAGGCAGATGATTGTTGGATGCCCTCAACTACTTGCTTTAAACATTGACATCATGAAACTTAGCTTCGATTACTTCAAGGTGGAGATGAAGAGACCTATGGAAGACTTGGTTACTTTCCCAGCTTTCTTTACTTACGGTCTGGAGTCAACCGTAAAGCCTAGACAAAAGATGGTCACCAAGAAAGGGTTGAAGTGTTCTCTTGCATGGATGCTTAATTGCTCTGACGAAAAATTTCAGCAACGAATGGATTATGATACTATTGACATGGAAGAGATGGAAATGGAACCATCATTTGACATGAATTCACTAATGCAACCAAGGAGTTATGATGAATCCGGTTCTGATTATGAAGATAGTGATGATGATATTGATTAG 1506 0.4216 MKVMTFSVGITKPNLLFGLPFSCVRRITGFHYSVANKTFTCSSIAQPTANFDSGRVRRRKGGSSSLYIHPSLPEMRKDMLATRKKVYEFLISVGIVPDELDGLELPVTIEVMTERVEFLHNLGLTVEDINNYPLVLGCSVKKNMVPVLDYLGKLGVRKSTFTQFLRRYPQVLHASVVVDLVPVVKYLQGMDIRPEDIPRVLERYPEVLGFKLEGTMSTSVAYLVGVGVARREIGGVLTRYPEILGMRVGRIIKPFVEFLQNLGIPRLAIARLIEQRPYILGFGLDEKVKPNVESLEEFNVRRTSLPSIIAQYPDIIGIDLKPKLVNQRSLLNSVLDLDPEDFGRIVEKMPQVVSLSSEPMLKHVDFLKECEFSLQQMRQMIVGCPQLLALNIDIMKLSFDYFKVEMKRPMEDLVTFPAFFTYGLESTVKPRQKMVTKKGLKCSLAWMLNCSDEKFQQRMDYDTIDMEEMEMEPSFDMNSLMQPRSYDESGSDYEDSDDDID* 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0948 501 PANTHER CGI-12 PROTEIN-RELATED 47 487 IPR003690 GO:0003690|GO:0006355
Lan1g0948 501 Gene3D Transcription termination factor 3, mitochondrial 75 177 IPR038538 -
Lan1g0948 501 Gene3D Transcription termination factor 3, mitochondrial 250 464 IPR038538 -
Lan1g0948 501 MobiDBLite consensus disorder prediction 476 501 - -
Lan1g0948 501 Pfam mTERF 148 456 IPR003690 GO:0003690|GO:0006355
Lan1g0948 501 SMART mt_12 126 157 IPR003690 GO:0003690|GO:0006355
Lan1g0948 501 SMART mt_12 270 301 IPR003690 GO:0003690|GO:0006355
Lan1g0948 501 SMART mt_12 410 441 IPR003690 GO:0003690|GO:0006355
Lan1g0948 501 SMART mt_12 234 265 IPR003690 GO:0003690|GO:0006355
Lan1g0948 501 SMART mt_12 306 338 IPR003690 GO:0003690|GO:0006355
Lan1g0948 501 SMART mt_12 343 373 IPR003690 GO:0003690|GO:0006355
Lan1g0948 501 SMART mt_12 162 193 IPR003690 GO:0003690|GO:0006355
Lan1g0948 501 SMART mt_12 198 229 IPR003690 GO:0003690|GO:0006355
Lan1g0948 501 SMART mt_12 378 409 IPR003690 GO:0003690|GO:0006355
Lan1g0948 501 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF4, CHLOROPLASTIC 47 487 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0948 Lan-Chr1 20125314 20127258 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Lan1g0948 mTERF 1.1e-105 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0948 K15032 - gmx:100785223 758.829