Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0934 ATGGAAGGAGAGAGAGGTTTTCCTAATTATGAACTCCAAGTTTCATTCACAAACACACCTCAACCTATACAAGATATGAGTTTTGTTCAATTTGAACAAAATCATGTTCTTAGCTTCTTAGCACCTTCAGCTCAATCCCAATCTTCTCAGATCTCTCAACCTCTAAACACCGCTGCTACTAAAGCCGCAACCACCACCACCACCACAGCCGCCGCTGTCACAAGGCCCACAACCCTGGAATTCAGCCATAATGACCTTGTCACTAGAAATTCTTGGAATAATGAACAGGTACAAACCCTGGATCCGAAGGGTGTTAATAATGATGAAAATTGCAGTGGAAATACTAGTGATGGCAACAACACATGGTGGAGAAGTGCAGGGTCAGAGAAGAACAAGGTGAAAATGAGGAGGCAGCTTAGAGAGCCAAGGTTTTGTTTCCAAACAAGAAGTGATGTGGATGTGCTTGATGATGGTTACAAATGGAGAAAATATGGCCAGAAAGTTGTCAAGAATAGCCTTCATCCAAGAAGTTACTATCGTTGCACTCATAACAATTGTAGAGTGAAGAAAAGAGTTGAACGACTCTCAGAAGATTGTCGTATGGTTATAACTACCTATGAAGGAAGACACAATCACATTCCTTGTGATGATGCAAATTCTTCTGAAGATGATTGCTTCACCTCTTTCTGA 690 0.413 MEGERGFPNYELQVSFTNTPQPIQDMSFVQFEQNHVLSFLAPSAQSQSSQISQPLNTAATKAATTTTTTAAAVTRPTTLEFSHNDLVTRNSWNNEQVQTLDPKGVNNDENCSGNTSDGNNTWWRSAGSEKNKVKMRRQLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHNHIPCDDANSSEDDCFTSF* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0934 229 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 12 227 IPR044810 GO:0003700
Lan1g0934 229 MobiDBLite consensus disorder prediction 99 129 - -
Lan1g0934 229 Pfam WRKY DNA -binding domain 156 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan1g0934 229 ProSiteProfiles WRKY domain profile. 150 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan1g0934 229 PANTHER WRKY TRANSCRIPTION FACTOR 12-RELATED 12 227 - -
Lan1g0934 229 SUPERFAMILY WRKY DNA-binding domain 147 212 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lan1g0934 229 MobiDBLite consensus disorder prediction 99 127 - -
Lan1g0934 229 SMART WRKY_cls 155 214 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lan1g0934 229 Gene3D WRKY domain 142 208 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0934 Lan-Chr1 20031661 20037492 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0934 3 229 WRKY Transcription Factor Family AT2G44745 56.540 1.66e-75 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lan1g0934 WRKY 1.8e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0934 - - var:108347245 360.147