Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0929 ATGGCTTCTCCTACTTCTCCAACAGATCCATCTCCACCTTTTGCTCTTCCTCTCCTTCCCCCTCCTCCCTCCTCCACCTCATCCCGCCGCCTTCCTCCGCCGTGCTGGTCCCCGGAAGAAACCGCCGCTCTTATTAACTCCTACCGTGACAAATGGTACTCCCTCGCCCGGAGCAATCTCAAGGCTACGCACTGGCAGGAGGTGGCTGACGCCGTCTCCGCCGCGTGTCCTAATGTGTCACCTCCTAAGACCGCCGTCCAGTGCCGTCACAAGATGGAGAAGCTTCGGAAGCGATATCGCGCTGAGATCCAGCGCGCTCGGAATCTTCCGGTGAAGAAATTCAACTCGTCATGGCTCCATTTCAAGCTCATGGATTCAATGGAAAAAGGTCCTTTGCCACCGAAATCTGATAACAATAACAACGATTACGCTGATTTCGTCGATGTCGATGATGAAATTGACGCTGAGGATGATGAGGATCAGGATTTCATCCACGCCAATTCGCTCTACAAATTGCGCAGGAACGGGATCGGGAGTTCAGGCGGCGACGGTGGAATTGGCGGCGGCGGTAGCCGTAGAGTTGAAGGAGGTTTTCGGATTAGGATTCCGAGTGGTGTGAGTGTAGCGAAACCTGATTCAAGGTTTTATGGGAGATTTAGTGATGAGAAACGGAACCCTAATTCTAGCTATGGTGCCAAAAGTGTGAAGGAGGGAAGTGCATTGGGGAAGAGAGAGAGGGACCCGGTGGAGGAGATGGTGAATGCAATTAAGGTTTTGGCAGATGGATTCGTGAGGACGGAGCAGATGAAGATGGAGATGGCGAGAGAGATCGAAAGTATGAGGATGGATATGGAGATGAAGAGGACTGAGATGATATTGGAATCACAGCACCGGATTGTCGAGGCTTTCGCCAATGCCGTTTCCGCGCAGAACAAGAAAACTAAGACGGTACCATCATCCCCTGAATCATAG 972 0.5195 MASPTSPTDPSPPFALPLLPPPPSSTSSRRLPPPCWSPEETAALINSYRDKWYSLARSNLKATHWQEVADAVSAACPNVSPPKTAVQCRHKMEKLRKRYRAEIQRARNLPVKKFNSSWLHFKLMDSMEKGPLPPKSDNNNNDYADFVDVDDEIDAEDDEDQDFIHANSLYKLRRNGIGSSGGDGGIGGGGSRRVEGGFRIRIPSGVSVAKPDSRFYGRFSDEKRNPNSSYGAKSVKEGSALGKRERDPVEEMVNAIKVLADGFVRTEQMKMEMAREIESMRMDMEMKRTEMILESQHRIVEAFANAVSAQNKKTKTVPSSPES* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0929 323 Coils Coil 89 109 - -
Lan1g0929 323 MobiDBLite consensus disorder prediction 1 35 - -
Lan1g0929 323 PANTHER TRANSCRIPTION FACTOR 4 319 - -
Lan1g0929 323 Pfam Myb/SANT-like DNA-binding domain 34 127 IPR044822 -
Lan1g0929 323 ProSiteProfiles Myb-like domain profile. 36 96 IPR001005 -
Lan1g0929 323 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 4 319 IPR044823 -
Lan1g0929 323 Gene3D - 36 101 - -
Lan1g0929 323 MobiDBLite consensus disorder prediction 216 243 - -
Lan1g0929 323 SMART 118neu2 43 132 IPR006578 -
Lan1g0929 323 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0929 Lan-Chr1 19993937 19995855 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0929 5 127 Trihelix Transcription Factor Family AT3G14180 32.824 4.13e-15 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lan1g0929 Myb_DNA-bind_4 2.8e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0929 - - vun:114179736 334.724