Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0924 ATGTCCTTCAATCAATCAAACTCGGATAATAAGACTCAGTCTGTGTATCCAAAATCAGGTCGATCCGCCACATTCAATCATCACCGCCCTTCCTCACCCTCCTACGTCAAGCCCGGTGCCGGTGGTGGTGCCGGTGGTGGTGCTGGTGGTTCCTCAATTTCATCTACCCGGAGTTTCAACAAGAAGTCTAATAATGCACAAGGTGGGCAATCTAGGGCAAACCCTACCCCAGTGAATTCAACAGAGGCTAATTATGCTCCGGCTGCCGGTACCATACAGAATGGATCCCACGTACAACCACAATTGCATGGAGCCCCTGGTATGTCAGTTACAACCAAACCATCTGAATCATCAGCTGCACAGAGGAGCAGTGAAGCCGTTCCAAAAGCCTCAATTCCTCAACCGCCACCCCCCATGAGTTCTGGTGCAGCCACCCCTACAACCCCGGCTAAGGGAGATGCATCCAAGACATTCCCTTTCCAATTTGGATCCATTAGTCCTGGCTTTATGAATGGGATGGCAATTCCAGCTCGCACTAGCTCAGCTCCTCCTAATATAGACGAGCAGAAGCATGATCAGGTTCATCACGACTCCTTTAGATCTGTGCCTTCAGGGCCGACACCACCTGTTCCGAAGCAGCAGCAACCACCTAGGAAAGATGCAGGTGTCACTTATCAATCTAATGCTGGGGAGACTCATATAGGAACTAAGGGAAGGAAGGAACCTCAGGTATCAGCTTCGATCCCAGCAGGCCTGATTCAGAAGCCTTCTGTTGTTTCTGTAACTGGGCCTTCAATGGCAATGCCATATCATCACTCCCAGGCATCTTTACAGTTTGGTGGTCCTAATCCACATATTCAATCTCAGGATATTTCAACAGCATCCCTCCAGATGCCTATGCCGATACCTATACCATTTGGAAATGCTGCCCAAGTGCAACAACAGGTTTTTGTGCCTGGTCTTCGACCTCATCTAATGCATCATCCAAGGATAATGCATCAAGGCCAGAACATGAGTTTTACTCCTCCAATGAGTCATCAGCTGCCCCATCAGTTAGGTATGGGCATTGGCATAAGCCCCCAATATCCTCAGCAGCAAGGAGGAAAGTTTGCCACTTCTCGAAAAACTACTACTGTGAAGATTACTCATCCCGAGACACATGAAGAGCTGAGGCTTGATAAAAAAACAGATGCTTATTCAGATGGTGGAACATCGGGTGTCAGGTCGCATCCTAACATGCCTTCTCAATCTCAGCCTGTTCAATCTCTTGCAGCTTCTACTCCTATGAACTATTATTCAAGTTCTCGCTATTATCCACCTCCTACTTCTCTTCCGCCAACAAGCAGCCAGATAACTCCAAATTCTCAACAACCAAGATCTAATTATCCGTTGAACCATGGTCCAGAAAATGCTGGTTTCATGAATTCATCATCACTTGGTTCTCCGAAAGCTAGCACTCCTATTACTGGCATTGTTGAAGCACATAATTCAGAAAGTTCCCGTGATGTGCCTAATGTGCCATCATCAGCTCCATTTGGAGCAACTTCTGTAACTATTAAGCCAAGTGGCCTATCTGCTGTTGTGGACTCATCATTGCCCAATTCCAGTATTTCTGGTATTCAAAATAGAGAGTCTAGTTCAACAGCGTCTTTTGATACTAGCTCCTTTGTGCTACAAAAAGGTTCTGAAACTGGTACAGATAACTCCTCACTGACGTCTAAATTGGCCAGCAACTCTTCAGTTTTGTGTTCACTGCCAAAAGAATCTTCTGCATCTGTTGCGGTATCTGATGAGAAGCTTACAGCCACTCCCTTGACACTTCCTTCATCAACTCCTAGTATGGATTCTGTCCTGGTTGTGTCTAATAATGAAGCCCAAATGAAGGAATCTCTTAGTAGTTCTAACTCTCTGAAGGATAATCATAGTAATCCATCGAAGAAAGGTCAATTACAACAGGTTCCTGTGAAATCCCCTACAGAGGCTAATGTGTCTTCTCAGGCTGTTGACATTGGTAAATCTGATATTGGAGTTTCCGAACCTGCAGGAGCTAAAATAAAGTATTCTGTGGCAGTTAACACTGAAGCTCTTCCATCATATCCTGACACAGCATCAGTTACCAGCAGGAGCATTCCAAGTGCTGTTGAAGCGAAGACCAACTGTTCTGCCGATTTTTCAGCTCGTGTTTCAGCGGAAGGATATGGAACACAAGGTGCTGATAGTTTGAACAATGATAAGCACGATAAGATAGATGATTCACCAGAAGACCCACAGTCTGCTGATCATCCAGAAAAAACTTCAACACATGTCAAGGATTGTTCAGATAATGCTGGCATTGACTCAATGTCTCTTCCAGTGTCAGGTAACAAGAATACACAAGCTTCAGAAGCAAATAAGGTGAATAATACATCTAAAGCAAAGAAGAAAAGAAAAGAGATTCTTCAGAAAGCAGACGCTGCCGGATCCATTTCTGATATTTATAATGCATACAAGGGACCCGAGGAAAAGAAAGAAGCTGTACTGAGTTCAGAGACCACCGAAAATGATTCTACTTCTAGAAGTTTGAAGCAGTTGCCGGCTGATGTTGCTCAACTGGGTGCTGTAGCAACCGAGAAATGTGGAGAGAGTAAAGCTGAACCTGATGACTGGGAGGATGCAGCTGACATGTCTACACCCAAACTTCAAGCTGCTGATAAATTACAACAGGTTAGCGATGAAAGTGGAGGTACAGCCAAAAAGTACTCTCGAGATTTCCTTTTGAAATTCTCAGAGCAATGCACTGATCTTCCTGAAGGTTTTGAAATCTCGGCAGACTTTGATGGGGCTTTGATGAGCAATAATATTAGGAGTGTTCATGTTTTTGAGCGGGATTCACATCCTAACCCCCGAAGAAATGTAGATATGCTGGATGGAATGTCTCGGATGGATCGCCGTGGAAGTGGTATGATTGAGGATAAGAGATGGAATAAAGTTTCTGGCGCTTTTCATTCTGGACGTGGTTTGGATGGTATTGGAGGTAACGCTGGATATCGAGCTGGCCAAGGGGGTAATTCTGGTGTTTTAAGGAATCCTCGATCACAGATACCCTTACAGTATGGGTCAGTTGAATCGATGGGAAATCAGGGTGGAATGCAAAGAAATAGCCCTGATGGTGAAAGGTGGCAACGTTCTGCTGGCTTCCAGCAGAGGGGTTTAATTCATTCACCTCAAATTCCTTTACAGATGATGCACAAAGCTGAGAAGAAGTATGAAGTGGGTAAAATACCAGATGCGGAACAGGCAAAGCAGAGACAATTGAAAGCTATCTTGAACAAACTAACCCCTCAGAATTTTGAGAGGCTTTTTGAACAGGTAAAAGCAGTTAATATTGATAATGCAGTCACCCTCACTGGTGTGATCTCACAGATCTTTGAGAAGGCTCTTACGGAGCCTACCTTCTGTGAAATGTACGCCAACTTCTGTTCACATCTGGCTTCTGAGTTGCCTGATTTAAGTGAGGACAATGAAAAGATAACATTTAAGAGATTATTATTAAACAAATGCCAAGAGGAATTCGAGAGGGGTGAAAAAGAACAAGAGGAAGCCAATAAGGCTGACGAGGGAGAGGTAAAACAGTCAGATGAAGAAAGGGAGGATAGAAGAGTCAAGGCAAGAAGGCGTATGTTGGGCAACATCAGATTGATTGGAGAACTATATAAGAAGAGAATGTTGACCGAGAGGATAATGCACGAGTGCATCAAGAAGTTACTGGGTCAGTATCAGGATCCAGATGAGGAAGACATTGAAGCATTGTGCAAGCTGATGAGTACAATTGGGGAGATGATTGACCACCCCAAAGCCAAGATTCATATTGATGCGTATTTTGAAAGAATAAAGGTGTTATCAAACAATATGAACTTATCTTCAAGGGTAAGGTTCATGTTGAAGGATTCAATTGATTTGAGAAAGAATAAATGGCAAGAAAGGAGGAAAGTTGAAGGTCCGAAGAAGATCGATGAGGTACACAGAGATGCTGTGCAAGAGAGGCAAGCTCAAGCTAGTAGGACTGGTCGAGGTCCGGGCAACAATCCTTCTGCAAGAAGGAACCCCATGGATTTTGGCCCAAGAGGGTCATCAGTGTTGTCTTCTCCTACTGCTCAGGTGGGTGGACTGCGTGGGCAGCCTACTCAAGTTCGGGGGTATGGTTCTCAGGATGCTCGTTTTCAGGAAAGGCAATCTTATGAGGCTAGGACCTTGTCAGTTCCTTTGCCTCAAAGAACCTTAGCCGAGAATTCTTTAACCTTGGGACCCCAAGGTGGCCTTGCCAGGGGAATGTCAATTAGAGGATCGCCAGTAATTTCGAGTTCATCAAATTCTGATGGATTTCCTCTGCCTGGAGACTCTCACAGAATGACAAGTGGTATTAATAATTATAGCAATTTACCAGAGAGCGCACCATACAATTCAAGGGAGGCTCTTGCATCAAGACACGTGGATAGATTTTCCGGTTCAGTTGGTTATGATCAATCAAGTGCTTATGAGCGTAATATTAACTATGGTAACAGAGACTTGAATAATGGAGATCGGAATCTCGACAAACCTATTTTAATTTCACCTACTGCTCAATTGCACGGTTCAACAGTCTCCCACAATGTTCCTTCAGAGAAGGTATGGTCAGAAGAGCGACTGCAGGACATGTCCATGGCAGCAATCAGAGAATATTACAGTGCTAGAGATGACAAGGAAGTTGCATTATGTATCAAAGATTTGAGCTCTCCAAGCTTTCATCCTTCTATGGTTTCTCTTTGGGTCACAGACTCATTTGAGAGAAAGGACACAGAAAGAGATGTTTTGGCTACACTGCTAGTCAACCTTGTGAAATCTCAGGATGGAACCTTGAGTCAGGCCCATCTCGTCAAAGGGTTTGAATCTGTTCTCAGCACATTGGAGGATGCTGTTAATGATGCCCCCAGAGCAGCTGAGTTTCTTGGACGAATTTTCGCGAGAGTTATAACAGAGAGTGTAGTCACCTTGAATGAGATCGGGCGGCTAATACATGATGGCGGAGAAGAGGCAGGGAGTCTCTTAGAAGCTGGGCTTGCAGCTGATGTTCTAGGATGGACATTGGAGTCAATAAAAATGGAGAAAGGGGAAGCTGTACTTAGTGAGTTTCTTACAAGCTCTAACTTGTTGTTAGAAACTTTTAGGCCACCTAATCCCATTACCTCAAGGAAGTTAGAGAAATTTATTTAG 5229 0.4429 MSFNQSNSDNKTQSVYPKSGRSATFNHHRPSSPSYVKPGAGGGAGGGAGGSSISSTRSFNKKSNNAQGGQSRANPTPVNSTEANYAPAAGTIQNGSHVQPQLHGAPGMSVTTKPSESSAAQRSSEAVPKASIPQPPPPMSSGAATPTTPAKGDASKTFPFQFGSISPGFMNGMAIPARTSSAPPNIDEQKHDQVHHDSFRSVPSGPTPPVPKQQQPPRKDAGVTYQSNAGETHIGTKGRKEPQVSASIPAGLIQKPSVVSVTGPSMAMPYHHSQASLQFGGPNPHIQSQDISTASLQMPMPIPIPFGNAAQVQQQVFVPGLRPHLMHHPRIMHQGQNMSFTPPMSHQLPHQLGMGIGISPQYPQQQGGKFATSRKTTTVKITHPETHEELRLDKKTDAYSDGGTSGVRSHPNMPSQSQPVQSLAASTPMNYYSSSRYYPPPTSLPPTSSQITPNSQQPRSNYPLNHGPENAGFMNSSSLGSPKASTPITGIVEAHNSESSRDVPNVPSSAPFGATSVTIKPSGLSAVVDSSLPNSSISGIQNRESSSTASFDTSSFVLQKGSETGTDNSSLTSKLASNSSVLCSLPKESSASVAVSDEKLTATPLTLPSSTPSMDSVLVVSNNEAQMKESLSSSNSLKDNHSNPSKKGQLQQVPVKSPTEANVSSQAVDIGKSDIGVSEPAGAKIKYSVAVNTEALPSYPDTASVTSRSIPSAVEAKTNCSADFSARVSAEGYGTQGADSLNNDKHDKIDDSPEDPQSADHPEKTSTHVKDCSDNAGIDSMSLPVSGNKNTQASEANKVNNTSKAKKKRKEILQKADAAGSISDIYNAYKGPEEKKEAVLSSETTENDSTSRSLKQLPADVAQLGAVATEKCGESKAEPDDWEDAADMSTPKLQAADKLQQVSDESGGTAKKYSRDFLLKFSEQCTDLPEGFEISADFDGALMSNNIRSVHVFERDSHPNPRRNVDMLDGMSRMDRRGSGMIEDKRWNKVSGAFHSGRGLDGIGGNAGYRAGQGGNSGVLRNPRSQIPLQYGSVESMGNQGGMQRNSPDGERWQRSAGFQQRGLIHSPQIPLQMMHKAEKKYEVGKIPDAEQAKQRQLKAILNKLTPQNFERLFEQVKAVNIDNAVTLTGVISQIFEKALTEPTFCEMYANFCSHLASELPDLSEDNEKITFKRLLLNKCQEEFERGEKEQEEANKADEGEVKQSDEEREDRRVKARRRMLGNIRLIGELYKKRMLTERIMHECIKKLLGQYQDPDEEDIEALCKLMSTIGEMIDHPKAKIHIDAYFERIKVLSNNMNLSSRVRFMLKDSIDLRKNKWQERRKVEGPKKIDEVHRDAVQERQAQASRTGRGPGNNPSARRNPMDFGPRGSSVLSSPTAQVGGLRGQPTQVRGYGSQDARFQERQSYEARTLSVPLPQRTLAENSLTLGPQGGLARGMSIRGSPVISSSSNSDGFPLPGDSHRMTSGINNYSNLPESAPYNSREALASRHVDRFSGSVGYDQSSAYERNINYGNRDLNNGDRNLDKPILISPTAQLHGSTVSHNVPSEKVWSEERLQDMSMAAIREYYSARDDKEVALCIKDLSSPSFHPSMVSLWVTDSFERKDTERDVLATLLVNLVKSQDGTLSQAHLVKGFESVLSTLEDAVNDAPRAAEFLGRIFARVITESVVTLNEIGRLIHDGGEEAGSLLEAGLAADVLGWTLESIKMEKGEAVLSEFLTSSNLLLETFRPPNPITSRKLEKFI* 1743
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0924 1742 Gene3D - 1547 1742 - -
Lan1g0924 1742 Pfam MIF4G domain 1095 1317 IPR003890 GO:0003723|GO:0005515
Lan1g0924 1742 MobiDBLite consensus disorder prediction 383 398 - -
Lan1g0924 1742 MobiDBLite consensus disorder prediction 779 800 - -
Lan1g0924 1742 MobiDBLite consensus disorder prediction 733 814 - -
Lan1g0924 1742 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4G-LIKE 143 1732 - -
Lan1g0924 1742 Pfam MA3 domain 1561 1667 IPR003891 -
Lan1g0924 1742 MobiDBLite consensus disorder prediction 383 487 - -
Lan1g0924 1742 MobiDBLite consensus disorder prediction 1368 1391 - -
Lan1g0924 1742 MobiDBLite consensus disorder prediction 1 31 - -
Lan1g0924 1742 ProSiteProfiles MI domain profile. 1554 1678 IPR003891 -
Lan1g0924 1742 MobiDBLite consensus disorder prediction 1186 1213 - -
Lan1g0924 1742 MobiDBLite consensus disorder prediction 1 224 - -
Lan1g0924 1742 SMART if4_15 1095 1317 IPR003890 GO:0003723|GO:0005515
Lan1g0924 1742 MobiDBLite consensus disorder prediction 448 487 - -
Lan1g0924 1742 MobiDBLite consensus disorder prediction 1320 1391 - -
Lan1g0924 1742 MobiDBLite consensus disorder prediction 741 770 - -
Lan1g0924 1742 Gene3D - 1095 1330 - -
Lan1g0924 1742 SUPERFAMILY ARM repeat 1550 1739 IPR016024 -
Lan1g0924 1742 SMART ma3_7 1555 1669 IPR003891 -
Lan1g0924 1742 MobiDBLite consensus disorder prediction 1033 1053 - -
Lan1g0924 1742 MobiDBLite consensus disorder prediction 49 128 - -
Lan1g0924 1742 MobiDBLite consensus disorder prediction 1320 1341 - -
Lan1g0924 1742 SUPERFAMILY ARM repeat 1090 1319 IPR016024 -
Lan1g0924 1742 MobiDBLite consensus disorder prediction 402 438 - -
Lan1g0924 1742 Coils Coil 1177 1197 - -
Lan1g0924 1742 MobiDBLite consensus disorder prediction 626 665 - -
Lan1g0924 1742 MobiDBLite consensus disorder prediction 834 853 - -
Lan1g0924 1742 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 143 1732 IPR045208 GO:0003743
Lan1g0924 1742 MobiDBLite consensus disorder prediction 144 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0924 Lan-Chr1 19950521 19958682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0924 1 1741 Eukaryotic Initiation Factors Gene Family AT3G60240 46.740 0.0 1273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0924 K03260 - gmx:100798562 2099.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0082 12 812747 821524 Lan1g0924 1 19950521 19958682 LSH
Lan1g0924 1 19950521 19958682 Lan1g2063 1 35811222 35820280 LSH