Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0922 ATGTTCCGCCGAGCAACAACCCTCCTCCGTCGTCCCCTTAACGCCGCCGCCGCATCAAAGCGATTCTCCACCGATCTCCCCGTGGAACCAGCGACAGATGCGAGTTTCGTGGAGGCATGGAAGAAAGTGAGCCCACACATAGATCCACCAAAGACTCCATTGTCATACTTGAAGCCTCGTCCTTCAATTCCTTCTTCTCTCCCTACTAAGCTCACTGTTAATTTCGTCCTTCCTTATTCTTCTGAATTAGCTTCCAAAGAGGTGGACATGGTGATAGTACCAGCAACAACTGGACAAATGGGTGTTCTCCCTGGACATGTTGCAACAATTGCTGAGTTGAAACCAGGAGTCCTATCTGTACATGAAGGGAATGACATCACCAAGTATTTTGTCAGCAGCGGCTTCGCTTTCATCCATGCAAACTCCGTTGCCGATGTAATTGCTGTTGAGGCTGTACCACTCGATCAAATCGATGCACACTTGGTCCAGAAGGGTCTTCAAGATTTTACTCAGAAGCTGAACTCAGCCACAACTGATTTGGAGAAAGCTGAAGCTCAGATTGGGGTTGATGTCCATAGTGCTCTCAACTCAGCTCTCACAGGTTGA 606 0.4851 MFRRATTLLRRPLNAAAASKRFSTDLPVEPATDASFVEAWKKVSPHIDPPKTPLSYLKPRPSIPSSLPTKLTVNFVLPYSSELASKEVDMVIVPATTGQMGVLPGHVATIAELKPGVLSVHEGNDITKYFVSSGFAFIHANSVADVIAVEAVPLDQIDAHLVQKGLQDFTQKLNSATTDLEKAEAQIGVDVHSALNSALTG* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0922 201 CDD F1-ATPase_delta 71 194 IPR001469 GO:0015986|GO:0045261|GO:0046933
Lan1g0922 201 Gene3D - 62 157 IPR036771 -
Lan1g0922 201 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 72 143 IPR020546 GO:0015986
Lan1g0922 201 Coils Coil 166 186 - -
Lan1g0922 201 Gene3D - 158 200 - -
Lan1g0922 201 PANTHER ATP SYNTHASE SUBUNIT DELTA', MITOCHONDRIAL 1 201 - -
Lan1g0922 201 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 71 152 IPR036771 -
Lan1g0922 201 TIGRFAM ATP_synt_epsi: ATP synthase F1, epsilon subunit 82 186 IPR001469 GO:0015986|GO:0045261|GO:0046933
Lan1g0922 201 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 1 201 IPR001469 GO:0015986|GO:0045261|GO:0046933
Lan1g0922 201 Hamap ATP synthase epsilon chain [atpC]. 69 189 IPR001469 GO:0015986|GO:0045261|GO:0046933
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0922 Lan-Chr1 19936597 19940445 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0922 1 201 Primary Pumps ATPases AT5G47030 70.244 2.48e-105 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0922 K02134 - gmx:100780778 329.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0080 12 780576 783444 Lan1g0922 1 19936597 19940445 LSH