Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0921 ATGTTCCGCCGAGCAACAACCCTCCTCCGTCGTCCCCTTAACGCCGCCGCATCAAAGCGATTCTCCACCGATCTCCCCGTGGAATCAGCGGCAGATGCGAGTTTCGTGGAGGCGTGGAAGAAAGTGAGCCCACACATAGATCCACCAAAGACTCCATTGTCATACTTGAAGCCTCGTCCTTCAATTCCTTCTTCTCTCCCTACTAAGCTTACTGTTAATTTCGTTCTTCCTTATTCTTCTGAATTGGCTTCCAAAGAGGTGGACATGGTGATAGTACCAGCAACAACTGGACAGATGGGTGTTCTTCCCGGACATGTTGCAACAATTGCAGAGTTGAAACCGGGAGTCCTATCTGTACATGAAGGGAATGACATCACCAAGTATTTTGTCAGCAGCGGCTTTGCTTTCATCCATGCAAACTCCGTTGCTGATGTAATTGCTGTTGAGGCTGTACCACTGGATCAAATCGACGCAAACTTGGTCCAAAAGGGTCTTCAAGATTTCACTCAGAAGCTGAACTCAGCCACAACTGATTTGGAGAAAGCTGAAGCTCAGATTGGAGTTGATGTCCATAGTGCTCTCAACTCAGCTCTCACAGGCTGA 603 0.4826 MFRRATTLLRRPLNAAASKRFSTDLPVESAADASFVEAWKKVSPHIDPPKTPLSYLKPRPSIPSSLPTKLTVNFVLPYSSELASKEVDMVIVPATTGQMGVLPGHVATIAELKPGVLSVHEGNDITKYFVSSGFAFIHANSVADVIAVEAVPLDQIDANLVQKGLQDFTQKLNSATTDLEKAEAQIGVDVHSALNSALTG* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0921 200 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 1 200 IPR001469 GO:0015986|GO:0045261|GO:0046933
Lan1g0921 200 Gene3D - 157 199 - -
Lan1g0921 200 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 70 151 IPR036771 -
Lan1g0921 200 CDD F1-ATPase_delta 70 193 IPR001469 GO:0015986|GO:0045261|GO:0046933
Lan1g0921 200 TIGRFAM ATP_synt_epsi: ATP synthase F1, epsilon subunit 81 185 IPR001469 GO:0015986|GO:0045261|GO:0046933
Lan1g0921 200 Coils Coil 165 185 - -
Lan1g0921 200 Hamap ATP synthase epsilon chain [atpC]. 68 188 IPR001469 GO:0015986|GO:0045261|GO:0046933
Lan1g0921 200 PANTHER ATP SYNTHASE SUBUNIT DELTA', MITOCHONDRIAL 1 200 - -
Lan1g0921 200 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 71 142 IPR020546 GO:0015986
Lan1g0921 200 Gene3D - 61 156 IPR036771 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0921 Lan-Chr1 19932265 19935396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0921 1 200 Primary Pumps ATPases AT5G47030 71.707 2.24e-107 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0921 K02134 - gmx:100780778 332.413