Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0896 ATGGATTTGGAATCTGGAGCAGAAACTATTGATGCAGAAAATGTTGATGAAAGTTCTGCTGAGAAAATATCAGCAATAGTAGTATCTGAAGAAAATTCACCTAGGGAACCATATGCAGGCATGGAATTTGAGTCTGAAGATGATGCCAAGTACTTTTATGGCGAATATGCGAGACGCGAAGGGTTCAGTATGCGCCTTGATCGCTGTCATCGTTCGGATGTTGACAACCGAATCATTTCTCGTCGCCTTTCGTGTAACAAGCAAGGTTTTAATATGAGAGGCAAAAATGGAACCCAACCTGTTAAGAAACCGAGGGTTAGCATAAGAGAAGGGTGTGAGGCAATGTTGTGGGTTAAAGAGAATAAATGTGGGAAATGGGTTGTTACTAAATTTGTAAAAGAACATAATCATCCACTATATGGTTCTGGTGGTGCATCTCCTTCCTATAAATTATTGGAATCCAAGGACAGGAAGATTCATCAACTCGAAAAGGAACTTGAGCGTCGAGATCAACAATGTCAACAATATCGCAGACTTTTACTTTCCCTCCTGGAAACTGTTGATGACCAAACAGAATTCTTCTCAGGAAAAGTTGAACTTATTGTTAACAATGTAAAACAACTTGAGAATGAAGTGCAAAAACCTTTGGACACTCACTAA 660 0.3939 MDLESGAETIDAENVDESSAEKISAIVVSEENSPREPYAGMEFESEDDAKYFYGEYARREGFSMRLDRCHRSDVDNRIISRRLSCNKQGFNMRGKNGTQPVKKPRVSIREGCEAMLWVKENKCGKWVVTKFVKEHNHPLYGSGGASPSYKLLESKDRKIHQLEKELERRDQQCQQYRRLLLSLLETVDDQTEFFSGKVELIVNNVKQLENEVQKPLDTH* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0896 219 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 12 216 - -
Lan1g0896 219 Coils Coil 152 179 - -
Lan1g0896 219 MobiDBLite consensus disorder prediction 1 38 - -
Lan1g0896 219 Pfam FAR1 DNA-binding domain 52 139 IPR004330 -
Lan1g0896 219 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE 12 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0896 Lan-Chr1 19738614 19741300 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Lan1g0896 FAR1 2.6e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0896 - - pvu:PHAVU_010G032600g 258.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g1839 11 35104058 35107379 Lan1g0896 1 19738614 19741300 PCT
Lan1g0896 1 19738614 19741300 Lan11g1839 11 35104058 35107379 PCT