Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0894 ATGTCCAAAACAGTTACAAGTTGTGTTCATTGGTTCTTGTTTCATATTTACTTCAGCTATGTCTTGTTGTTAACTCAATCAGCACCTCAAAATTCCCTTGTAACACAAGTTCCAGGCTTCAATGGTTCTTTACCTTCCAATCACTATGCTGGGTATGTGACGGTCGATGAAAATCATGGAAGGAACTTGTATTACTATTTTGTTGCATCAGAAGGTAAACCATCTGAGGATCCAGTTGTTCTGTGGCTTAATGGTGGTCCCGGGTGCTCTAGTTTCGATGGCTTCATATACGAGCATGGTCCTTTTAATTTTGAAGCCGCAAAGACAAAGGGAGGTCTACCGACACTGCACCTCAATCCACACAGCTGGTCAAAGGTTTCGAATGTTTTGTATTTGGATTCTCCTGCTGGTGTGGGGTTCTCATACTCAAAGAATGATACCGATTACATAACCGGAGACATAAAGACTGCCTCGGATACACATGCCTTTCTCCTTAAGTGGTTTAACCTATATCCCGAGTTCCTTCCCAATCCATTCTTCATTGCCGGAGAGTCATATGCTGGAGTTTATGTGCCTACTCTCGCTTATGAAGTAATGAAAGGAATTGATGCTGGTGCAAGGCCCATTCTGAATTTCCAGGGTTACATGGTTGGAAATGGTGTTACAGATGAACAAATTGACGGCAATGCTCTTGTACCATTTGCACATGGGATGGGTCTTATCTCTGATAATCTGTTTGAGGAGGTCAATGTTGAGTGCAAAGGGAATTTCTACAATTCGATAAGTGATAATTGCTCTAGCAAACTTGAAAAAGTTGATCAGGCCATTGATGGGTTAAACATATATGACATTCTAGAACCATGCTATCATGGCATAGAGGCAGAGGGGTTTACAGCATCCTCCTATATTAGGTTGCCATCTAGCTTCCGGAAACTGGGTGAGACTGAGAAACCTCTTGCCGTGAGGAAAAGAATGTTCGGTCGTGCTTGGCCCCTGAGAGCACCTGTCAGAGATGGATTCGTACCAACTTGGCCACAACTGAGCAATAGCAACAACGTTCCATGCACTGACGATGAAGTCGCAACCTCATGGTTGAACAATGCAGCAGTCAGGAAAGCAATTCACACAGTAGAGGAAAGTGTGGTCAGTAGTTGGGACTTATGTACAGACAGGATTTCATTCAATCATGATGCTGGGAGCATGATCAAGTTCCACAAGAACCTAACTTCCAAAGGATATCGAGCACTTATATACAGCGGTGATCATGACATGTGTGTTCCATTTACGGGGAGTCAAGCATGGACGAGATCAATCGGATACAAGATTGTTGATGAATGGAGGCCTTGGACATCCAACGGTCAAGTTGCTGGGTTTACACAAGGATATGACAAAAATCTCACTTTTCTGACCATAAAGGGTGCTGGGCATACTGTTCCTGAATATAAACCAAAGGAGGCATTGGATTTTTATACACGCTTTCTCTCTGGATTGCCAATCTGA 1500 0.432 MSKTVTSCVHWFLFHIYFSYVLLLTQSAPQNSLVTQVPGFNGSLPSNHYAGYVTVDENHGRNLYYYFVASEGKPSEDPVVLWLNGGPGCSSFDGFIYEHGPFNFEAAKTKGGLPTLHLNPHSWSKVSNVLYLDSPAGVGFSYSKNDTDYITGDIKTASDTHAFLLKWFNLYPEFLPNPFFIAGESYAGVYVPTLAYEVMKGIDAGARPILNFQGYMVGNGVTDEQIDGNALVPFAHGMGLISDNLFEEVNVECKGNFYNSISDNCSSKLEKVDQAIDGLNIYDILEPCYHGIEAEGFTASSYIRLPSSFRKLGETEKPLAVRKRMFGRAWPLRAPVRDGFVPTWPQLSNSNNVPCTDDEVATSWLNNAAVRKAIHTVEESVVSSWDLCTDRISFNHDAGSMIKFHKNLTSKGYRALIYSGDHDMCVPFTGSQAWTRSIGYKIVDEWRPWTSNGQVAGFTQGYDKNLTFLTIKGAGHTVPEYKPKEALDFYTRFLSGLPI* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0894 499 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 20 20 496 - -
Lan1g0894 499 Pfam Serine carboxypeptidase 38 496 IPR001563 GO:0004185|GO:0006508
Lan1g0894 499 PRINTS Carboxypeptidase C serine protease (S10) family signature 119 131 IPR001563 GO:0004185|GO:0006508
Lan1g0894 499 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 142 IPR001563 GO:0004185|GO:0006508
Lan1g0894 499 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 192 IPR001563 GO:0004185|GO:0006508
Lan1g0894 499 PRINTS Carboxypeptidase C serine protease (S10) family signature 466 479 IPR001563 GO:0004185|GO:0006508
Lan1g0894 499 ProSitePatterns Serine carboxypeptidases, histidine active site. 466 483 IPR033124 GO:0004185
Lan1g0894 499 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 20 496 IPR001563 GO:0004185|GO:0006508
Lan1g0894 499 Gene3D - 351 498 - -
Lan1g0894 499 ProSitePatterns Serine carboxypeptidases, serine active site. 181 188 IPR018202 GO:0004185
Lan1g0894 499 SUPERFAMILY alpha/beta-Hydrolases 34 498 IPR029058 -
Lan1g0894 499 Gene3D alpha/beta hydrolase 26 325 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0894 Lan-Chr1 19724453 19729615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0894 360 499 Calmodulin-binding Proteins AT2G22960 45.000 2.81e-39 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0894 K16296 - gmx:100792057 857.44