Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0886 ATGAACCTATCAACTCCAAAAAACACTCCAATTACTTCAAAGATTCCTCAAATTTCTTACCCAAAAAAAAACAATTCATTAAAGTTTATGGATTTCCTAAGTCATACCAATTACTTACCCATAACTTTGTTCATATTTTCAACATTTTATTTGTGTTCAAATTCTTCAAGTATTCATGCTATTACATCAACCAGATTCATAACAGACAATGAGACAATAACCTCAAACAACACAAACTTGAAGCTAGGATTCTACAGCCCGGAAAATTCGACCGATCGATATCTAGCAATCTGGTATCTTTCTCAATCCTATGTTATATGGATAGCTAATAGAGATCAACCACTTAAAGATTCTTCCGGGGTTGCGAAAATTCACAAAGATGGCAATCTTGTGATAATGAATGGACAAAACATTATCATATGGTCTTCTAATGTTTCAACTAATTTAACCAATTCAACTGCTGAACTTCATGATTCAGGAAACCTTGTCCTTTACGATGTTATGTCAGGATCAGGATCAGGACAATTATTATGGGACAGTTTCTCACATCCTACTGATTCAGCAGTTCCAACAATGAGAGTAGCTTCAAACCCTTATACAGGTAAGAAAATTCAATATGTATCAAGAAAAAGTGATTCTGATCCTTCTAGTGGTTATTTCACTGTTAGTCTTGAAAGATTGGATACCCCAGAAGTGTTTTTTTGGTATAATAAAACAAGGCCTTATTGGAGGACTGGTCCTTGGAATGGAAGGTTCTTTCTTGGGACACCAAGGTTAACAACTGAATATTTATATGGTTGGCGTTTTGAAAATGATTCTGATGGAACTATATATGTAACTTATAGTGTTGCAGACCCAAATGATTTTGGAATTCTAAGCATTGTTCCAAGTGGTACACTTAAATTGGTGAGGATTTTAAACAAAGTTGAGTATGTGAATCTTGAAGTGGATCAAAATGAGTGTGATTTTTATGGTGCATGTGGTCCATTTGGAAGGTGTGATAATTCTACTATACCAATATGTAGTTGTTTTGAAGGGTTTGAGCCTAAGAATTTAGAGGAATGGAATATGAAAAATTGGAGTAATGGGTGTGTGAGAAATGTTCCATTGCAGTGTGGGAATATGAGTAATGGAAGTAGTGTTTTGGAACAAGATGGGTTTTTGGTGCATCATAATATGAAAGTTCCTGATTTATTAGAAAGATTATTAGATGTTGATCAAAATAAGTGTATGGAATATTGCTTAGGCAATTGTTCTTGTTTGGCTCATGCATATGATTCTTATATTGGATGCATGTATTGGACCAAAGACTTAATTGACTTACAAAAATTTCCATATGGAGGAGTTGATCTCTACATTCGTACCCCCCATTCGTTACTCGGTACAGATAAAAAGAGAAGAGGAAACAAGGCACTAATAGTTGGTGTTACTGCTGGAGCAATAGGAATAATTACCTTAGTGGTGTGTGCATATATTTTGTGGCAGAAATGGACTACTAAACAAACAGATACAAGAAATCATACTCAAAATTTAAGCAGTGGAGAACAAAAACAAACTAAACTTGAAGAGCTACCACTATTTGAATTTGAACAGCTTGCAACTGCTACAAATGATTTTCACTTGGCTAGTATGCTTGGGAAGGGAGGTTTTGGTCCTGTATACAAGGGAAAATTGGAAAATGGGCAAGAAATTGCTGTTAAAAGACTTGCAAAAGCATCTACACAAGGTTTAGAAGAATTCATGAATGAAGTGGTAGTGATTTCAAAACTTCAACATAGAAATCTTGTAAGACTTCTTGGATGTTGTATTGAAGGAGATGAACAAATGTTGGTATATGAGTTCATGCCAAATAAAAGTTTGGATGCATTTATCTTTGATCCACTTCAAAGGAAAGATTTAGATTGGAAAAAGCGCTTTAACATAATCCAAGGAATAGCTCGAGGAATACTTTATCTTCACAGAGATTCAAGATTAAGAATTATACATAGAGATCTCAAGGCAAGCAATATCTTACTCGACGATAAGATGAATCCAAAAATATCAGATTTTGGTTTGGCCAGGATTTTTAAAGGTGGTGAAGATCATGAAGTTAATACCAAAAGAGTCGTGGGAACATACGGTTACATGCCACCTGAATATGCAATGGAGGGGATATTTTCAGAGAAATCAGACGTCTATAGTTTTGGAGTATTGTTATTAGAGATTGTCACCGGAAGAAGAAACACTAGCTTTTATAACGAGGATTCACTTAGCCTTGTCGGATATGCATGGAAACTATGGAATGAAGAAAACATTACATCAATAATAGATGAAGAGATAAATGATCCATGCTTTGAGAATAGTATCTTAAGGTGCATACACATAGGACTTTTATGTGTTCAAGAACTTACAAAAGATAGACCAACTATGTCTACAATAGTTTTGATGCTAATAAGTGAAATTACACATCTTCCACCACCAAAAAAGGTAGCATTTGTTCATAAAGAAAGTTTATCATGTTCAACATCCTCTCAAAAAACTCAATCTCTTTCAAATAACAATGTAACTCTTAGTGAAGTTCAAGGTAGGTAA 2571 0.3446 MNLSTPKNTPITSKIPQISYPKKNNSLKFMDFLSHTNYLPITLFIFSTFYLCSNSSSIHAITSTRFITDNETITSNNTNLKLGFYSPENSTDRYLAIWYLSQSYVIWIANRDQPLKDSSGVAKIHKDGNLVIMNGQNIIIWSSNVSTNLTNSTAELHDSGNLVLYDVMSGSGSGQLLWDSFSHPTDSAVPTMRVASNPYTGKKIQYVSRKSDSDPSSGYFTVSLERLDTPEVFFWYNKTRPYWRTGPWNGRFFLGTPRLTTEYLYGWRFENDSDGTIYVTYSVADPNDFGILSIVPSGTLKLVRILNKVEYVNLEVDQNECDFYGACGPFGRCDNSTIPICSCFEGFEPKNLEEWNMKNWSNGCVRNVPLQCGNMSNGSSVLEQDGFLVHHNMKVPDLLERLLDVDQNKCMEYCLGNCSCLAHAYDSYIGCMYWTKDLIDLQKFPYGGVDLYIRTPHSLLGTDKKRRGNKALIVGVTAGAIGIITLVVCAYILWQKWTTKQTDTRNHTQNLSSGEQKQTKLEELPLFEFEQLATATNDFHLASMLGKGGFGPVYKGKLENGQEIAVKRLAKASTQGLEEFMNEVVVISKLQHRNLVRLLGCCIEGDEQMLVYEFMPNKSLDAFIFDPLQRKDLDWKKRFNIIQGIARGILYLHRDSRLRIIHRDLKASNILLDDKMNPKISDFGLARIFKGGEDHEVNTKRVVGTYGYMPPEYAMEGIFSEKSDVYSFGVLLLEIVTGRRNTSFYNEDSLSLVGYAWKLWNEENITSIIDEEINDPCFENSILRCIHIGLLCVQELTKDRPTMSTIVLMLISEITHLPPPKKVAFVHKESLSCSTSSQKTQSLSNNNVTLSEVQGR* 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0886 856 Pfam D-mannose binding lectin 105 210 IPR001480 -
Lan1g0886 856 Gene3D - 55 183 IPR036426 -
Lan1g0886 856 ProSiteProfiles PAN/Apple domain profile. 372 456 IPR003609 -
Lan1g0886 856 CDD STKc_IRAK 545 810 - -
Lan1g0886 856 SMART blect_4 64 184 IPR001480 -
Lan1g0886 856 Gene3D Phosphorylase Kinase; domain 1 513 614 - -
Lan1g0886 856 Pfam PAN-like domain 383 441 IPR003609 -
Lan1g0886 856 CDD PAN_AP_plant 368 456 - -
Lan1g0886 856 MobiDBLite consensus disorder prediction 837 856 - -
Lan1g0886 856 SMART ntp_6 382 455 IPR003609 -
Lan1g0886 856 ProSiteProfiles Protein kinase domain profile. 539 815 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0886 856 ProSiteProfiles Bulb-type lectin domain profile. 58 177 IPR001480 -
Lan1g0886 856 SUPERFAMILY Protein kinase-like (PK-like) 524 834 IPR011009 -
Lan1g0886 856 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 51 855 - -
Lan1g0886 856 Pfam S-locus glycoprotein domain 243 351 IPR000858 GO:0048544
Lan1g0886 856 Pfam Protein tyrosine and serine/threonine kinase 540 809 IPR001245 GO:0004672|GO:0006468
Lan1g0886 856 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 51 855 - -
Lan1g0886 856 Gene3D Transferase(Phosphotransferase) domain 1 615 817 - -
Lan1g0886 856 ProSitePatterns Serine/Threonine protein kinases active-site signature. 660 672 IPR008271 GO:0004672|GO:0006468
Lan1g0886 856 SMART serkin_6 539 803 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lan1g0886 856 PIRSF SRK 30 856 IPR024171 GO:0004674
Lan1g0886 856 SUPERFAMILY alpha-D-mannose-specific plant lectins 95 250 IPR036426 -
Lan1g0886 856 ProSiteProfiles EGF-like domain profile. 317 353 IPR000742 -
Lan1g0886 856 CDD B_lectin 64 184 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0886 Lan-Chr1 19655330 19659593 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0886 453 828 Receptor kinase-like Gene Family AT4G05200 51.724 1.19e-123 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lan1g0886 PK_Tyr_Ser-Thr 1.4e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0886 - - gmx:100811896 1219.14