Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0885 ATGACAGCTGGCGAAACTACTCGCCGACATTCCTTATCTTCTCTCTTCTCTCACGACGTCGTTTTACCCCAAACTACAACATCTCTCTCCGACATCATTAAACAAGACCAAGACAATGCAAACAACGTCAAAGACCGCAAATATTGGAAAGCTTTCAAACACAAGTTTCGGCTCAAGCGAACCGAACCGGTTCAATCTTCAACCATTCATAATAATACCACTATCCCTATTCCTATTCCTATTCCTGAACAACAAAACGACGTCGTTGAAGTTGATTCAAACAACGTCGAAGGGACTGATGACGTGGCGGTGGGTGGAACGGGGAATATGTTAGTTATGGATTTGTTAGAGGAGAGGGATATAGAAGAAGAAGAAGAAGAAAGTGAAGTTGAAAATAGTAATGGGTGCTGCGTGTGCATGGTGAGAGATAAAGGTGCAGCGTTTATACCATGCGGACATGTGTTCTGTACAATGTGTTGCAATCAGATATGGATTTTGTAG 501 0.4251 MTAGETTRRHSLSSLFSHDVVLPQTTTSLSDIIKQDQDNANNVKDRKYWKAFKHKFRLKRTEPVQSSTIHNNTTIPIPIPIPEQQNDVVEVDSNNVEGTDDVAVGGTGNMLVMDLLEERDIEEEEEESEVENSNGCCVCMVRDKGAAFIPCGHVFCTMCCNQIWIL* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0885 166 CDD RING-HC 136 164 - -
Lan1g0885 166 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 113 164 IPR013083 -
Lan1g0885 166 PANTHER OS01G0917900 PROTEIN 24 77 - -
Lan1g0885 166 PANTHER OS01G0917900 PROTEIN 109 165 - -
Lan1g0885 166 PANTHER OS01G0917900 PROTEIN 24 77 - -
Lan1g0885 166 PANTHER OS01G0917900 PROTEIN 109 165 - -
Lan1g0885 166 SUPERFAMILY RING/U-box 135 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0885 Lan-Chr1 19643106 19643687 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0885 24 165 C3H Transcription Factor Family AT3G25030 30.811 1.63e-20 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0885 - - lang:109359323 291.197